RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MPP5Q8N3R9 675 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 DEPDC1BQ8WUY9 529 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 RXFP2Q8WXD0 754 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 USP29Q9HBJ7 922 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 ETNK2Q9NVF9 386 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 ITM2AO43736 263 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 MICAL2O94851 1124 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 SERPINA6P08185 405 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 FASTKD1Q53R41 847 aaKnown RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 FKBP1CQ5VVH2 108 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 WDR75Q8IWA0 830 aaKnown RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 LRRC71Q8N4P6 559 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 RNF149Q8NC42 400 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 SLC17A6Q9P2U8 582 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 MAFBQ9Y5Q3 323 aaPredicted RBP10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
CX3CL1-201ENST00000006053 PRKCBP05771 671 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 DESP17661 470 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 CNPY1Q3B7I2 92 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PPP6R3Q5H9R7 873 aaPredicted RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 EFHC1Q5JVL4 640 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 CASC4Q6P4E1 433 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 UNC5BQ8IZJ1 945 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PPP2R3CQ969Q6 453 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PIWIL1Q96J94 861 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 HEXIM2Q96MH2 286 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 RNF157Q96PX1 679 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 FAM192AQ9GZU8 254 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 LHX5Q9H2C1 402 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PLAC1Q9HBJ0 212 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PNPLA8Q9NP80 782 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 DDX43Q9NXZ2 648 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 ZNF180Q9UJW8 692 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 A0A088AWK7 358 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 LOC100653049A0A140TA62 436 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 E2F8A0AVK6 867 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 SLC15A5A6NIM6 579 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 MSCO60682 206 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 KRT34O76011 436 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 HOXC6P09630 235 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 GPD1P21695 349 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 CRABP2P29373 138 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 SERPINB6P35237 376 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 GRIA1P42261 906 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 SFSWAPQ12872 951 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 DYNC1I2Q13409 638 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PEX6Q13608 980 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 ZPBP2Q6X784 338 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PLD5Q8N7P1 536 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 ACO2Q99798 780 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 S100A14Q9HCY8 104 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 THAP1Q9NVV9 213 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 FZD1Q9UP38 647 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 APOBEC2Q9Y235 224 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 SDR42E2A6NKP2 422 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 APOL1O14791 398 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 FAM189A1O60320 539 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 FKBP6O75344 327 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PRKCHP24723 683 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 RGS7P49802 495 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 FAM47CQ5HY64 1035 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 OR6Y1Q8NGX8 325 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 NRBP2Q9NSY0 501 aa10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 PIH1D1Q9NWS0 290 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 CPSF3Q9UKF6 684 aaKnown RBP10.87□□□□□ -0.67
CX3CL1-201ENST00000006053 HMX2A2RU54 273 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 SNNO75324 88 aaPredicted RBP10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 PROCP04070 461 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 CXCL8P10145 99 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 NCF2P19878 526 aaPredicted RBP10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 CCNFP41002 786 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 HMGCS2P54868 508 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 WASHC5Q12768 1159 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 SFT2D3Q587I9 215 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 TMCO4Q5TGY1 634 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 BSPRYQ5W0U4 402 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 DPY19L2Q6NUT2 758 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 ISLR2Q6UXK2 745 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 EEPD1Q7L9B9 569 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 DHDDSQ86SQ9 333 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 MAP7D3Q8IWC1 876 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 ST13P4Q8IZP2 240 aaPredicted RBP10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 SLC4A11Q8NBS3 891 aa10.86□□□□□ -0.67
CX3CL1-201ENST00000006053 GSDMBQ8TAX9 411 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms