RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DSG1Q02413 1049 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 GBE1Q04446 702 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 CFAP157Q5JU67 520 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 C6orf163Q5TEZ5 329 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 RASIP1Q5U651 963 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 ZNF534Q76KX8 674 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 TMEM176AQ96HP8 235 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 SIGLEC10Q96LC7 697 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 XAB2Q9HCS7 855 aaKnown RBP14.52□□□□□ -0.08
USH1C-201ENST00000005226 MFHAS1Q9Y4C4 1052 aa14.52□□□□□ -0.08
USH1C-201ENST00000005226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.09
USH1C-201ENST00000005226 SDR42E2A6NKP2 422 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 C2CD4BA6NLJ0 364 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 F8W8V4 182 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 STK10O94804 968 aaKnown RBP14.52□□□□□ -0.09
USH1C-201ENST00000005226 FARP2O94887 1054 aaPredicted RBP14.52□□□□□ -0.09
USH1C-201ENST00000005226 GSRP00390 522 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 IL1BP01584 269 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 TRMT5Q32P41 509 aaKnown RBP14.52□□□□□ -0.09
USH1C-201ENST00000005226 CCDC14Q49A88 953 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 SFT2D3Q587I9 215 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 PPM1JQ5JR12 505 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 FAM91A1Q658Y4 838 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 ZNF280CQ8ND82 737 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 AGBL3Q8NEM8 1001 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 SLC26A7Q8TE54 656 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 DEPDC1BQ8WUY9 529 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 WRNIP1Q96S55 665 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 LPIN3Q9BQK8 851 aa14.52□□□□□ -0.09
USH1C-201ENST00000005226 LACTBL1A8MY62 500 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 APOL1O14791 398 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 BUD23O43709 281 aaKnown RBP14.51□□□□□ -0.09
USH1C-201ENST00000005226 SPAG6O75602 509 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 KRT38O76015 456 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
USH1C-201ENST00000005226 TFDP2Q14188 446 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 ATF7IP2Q5U623 682 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 CASC4Q6P4E1 433 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 MFN1Q8IWA4 741 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 SCUBE3Q8IX30 993 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 CNPY3Q9BT09 278 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 CEP41Q9BYV8 373 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 KLC2Q9H0B6 622 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 ACSS2Q9NR19 701 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 ADAMTS6Q9UKP5 1117 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 WDR27A2RRH5 827 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 GPR25O00155 361 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 PTPRAP18433 802 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 ARRB2P32121 409 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 CCNFP41002 786 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 TUBB3Q13509 450 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 JADE1Q6IE81 842 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 CES3Q6UWW8 571 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 MAVSQ7Z434 540 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 B3GNT5Q9BYG0 378 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 ZNF358Q9NW07 568 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 DDX43Q9NXZ2 648 aaKnown RBP14.51□□□□□ -0.09
USH1C-201ENST00000005226 BTBD7Q9P203 1132 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 EMCNQ9ULC0 261 aa14.51□□□□□ -0.09
USH1C-201ENST00000005226 IGKV6D-21A0A0A0MT36 114 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 PROCP04070 461 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 SERPINA6P08185 405 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 GSTT1P30711 240 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 TCHHL1Q5QJ38 904 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 TEDDM1Q5T9Z0 273 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 N4BP2L1Q5TBK1 243 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 MPZL3Q6UWV2 235 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 RASSF3Q86WH2 238 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 TRIM42Q8IWZ5 723 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 RTKN2Q8IZC4 609 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 FAM172AQ8WUF8 416 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 MOCOSQ96EN8 888 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 SNRNP25Q9BV90 132 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 BCO2Q9BYV7 579 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 MIS12Q9H081 205 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 ZNF180Q9UJW8 692 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 MYO18AQ92614 2054 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 ADCY6O43306 1168 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 CILPO75339 1184 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 GSTA2P09210 222 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 CRHR1P34998 444 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 CLCN3P51790 818 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 EFNA5P52803 228 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 NDST1P52848 882 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 HIC1Q14526 733 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 FAM47CQ5HY64 1035 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 ZBTB8OSQ8IWT0 167 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 EBNA1BP2Q99848 306 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 CDT1Q9H211 546 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 RPF1Q9H9Y2 349 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 S100A14Q9HCY8 104 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms