RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 PmpcbQ9CXT8 489 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Asb1Q9WV74 336 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dock1Q8BUR4 1865 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 A930018M24RikB7ZMY3 218 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Dusp8O09112 663 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 FynP39688 537 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ppm1aP49443 382 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ripk2P58801 539 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Znf746Q3U133 652 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mylk3Q3UIZ8 795 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cnga4Q3UW12 575 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ubn1Q4G0F8 1135 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Orc2Q60862 576 aaKnown RBP16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Metap1Q8BP48 386 aaKnown RBP16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 MgarpQ8VI64 283 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Unc45aQ99KD5 944 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Plscr2Q9DCW2 307 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Pard6bQ9JK83 371 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Magel2Q9QZ04 1284 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Clcn2Q9R0A1 908 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mbd1Q9Z2E2 636 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm5538W4VSP6 401 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Trim12cD3Z3L3 497 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Vmn2r100E9QAZ9 850 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Lamp2P17047 415 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Msx3P70354 204 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cacna2d2Q6PHS9 1154 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q8BHN7 327 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Amer2Q8CCJ4 672 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 XkQ9QXY7 446 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tubd1Q9R1K7 455 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Card9A2AIV8 536 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Arhgap42B2RQE8 841 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm10717D3Z1I8 228 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 FancfE9Q5Z5 343 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 LgmnO89017 435 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Eno1P17182 434 aaKnown RBP16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Bmp2P21274 394 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Itgb7P26011 806 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Serpina5P70458 405 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Smcr8Q3UMB5 935 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm14685Q52KH6 695 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 AcdQ5EE38 416 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Usp17laQ61068 526 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Smarcd1Q61466 515 aaKnown RBP16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cyp3a13Q64464 503 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 OcrlQ6NVF0 900 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slfn5Q8CBA2 884 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cplx3Q8R1B5 158 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Usp3Q91W36 520 aaKnown RBP16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Spc24Q9D083 201 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Tspan17Q9D7W4 270 aa16.45■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cyp2t4E9PWV0 503 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm5814J3QP80 125 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Acvr2bP27040 536 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Kcnj6P48542 425 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Abi2P62484 446 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 TankP70347 448 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Shroom1Q5SX79 823 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Armc12Q80X86 340 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Plekha4Q8VC98 588 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Zcchc14Q8VIG0 956 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q99KU6 348 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mrfap1Q9CQL7 125 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 AticQ9CWJ9 592 aaKnown RBP16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gpihbp1Q9D1N2 228 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q9D4A5 307 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ccdc170D3YXL0 722 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ces1bD3Z5G7 567 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cyp2b23E9Q593 491 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Eftud2O08810 971 aaKnown RBP16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q3UK37 420 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Hspbap1Q8BK58 483 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Proser2Q8C5R2 471 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gsto2Q8K2Q2 248 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Dcp2Q9CYC6 422 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Strn3Q9ERG2 796 aa16.44■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mroh5E9PUJ8 762 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr743L7N1Y2 311 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Bcl7cO08664 217 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Sstr1P30873 391 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gdf7P43029 461 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Anxa5P48036 319 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Pik3r5Q5SW28 871 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 CpQ61147 1061 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 PrkciQ62074 595 aaKnown RBP16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q810S2 196 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 ClmnQ8C5W0 1052 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rnf208Q8K0W3 265 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slf1Q8R3P9 1054 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Hip1Q8VD75 1029 aaKnown RBP16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 DeraQ91YP3 318 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Xpo7Q9EPK7 1087 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ifnar2O35664 513 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gp1bbP56400 206 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Trim43bP86448 445 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 P3h1Q3V1T4 739 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Olfr8Q60892 310 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc20a1Q61609 681 aa16.43■□□□□ 0.22
Trim39-203ENSMUST00000113706 Phactr3Q8BYK5 558 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms