RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Q80WR5 230 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 C2cd2lQ80X80 706 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Wscd1Q80XH4 572 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tbc1d10bQ8BHL3 798 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cyp4a12aQ91WL5 508 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 SncaipQ99ME3 962 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmed5Q9CXE7 229 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cnbd2Q9D5U8 673 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 DcpsQ9DAR7 338 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Msh5Q9QUM7 833 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Klf6O08584 283 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 PostnQ62009 838 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 AarsQ8BGQ7 968 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tlk1Q8C0V0 766 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Robo4Q8C310 1012 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ndufaf1Q9CWX2 328 aa16.01■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Dpy19l4A2AJQ3 722 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Foxm1O08696 760 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tp53P02340 387 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Msr1P30204 458 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ptcd3Q14C51 685 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 DstykQ6XUX1 927 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Chsy1Q6ZQ11 800 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fam107aQ78TU8 144 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Afap1l1Q8BZI0 768 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Senp2Q91ZX6 588 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fam187aQ9D3R5 417 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Phka1P18826 1241 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Alkbh5Q3TSG4 395 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tespa1Q3U132 458 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 CopaQ8CIE6 1224 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Homer3Q99JP6 356 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Adi1Q99JT9 179 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rexo2Q9D8S4 237 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sh2b2Q9JID9 621 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cntnap2Q9CPW0 1332 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Arhgef37A1IGU4 676 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sdccag3A2AIW0 432 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Lilra5D3Z7A9 295 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Inpp1P49442 396 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mrgprx2Q3UG50 352 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 HnrnpdQ60668 355 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Lrrc8eQ66JT1 795 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 RadilQ69Z89 1099 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zdhhc15Q8BGJ0 337 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Znf426Q8R1D1 550 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Gpihbp1Q9D1N2 228 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Oma1Q9D8H7 521 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr271-ps1A0A1L1SQH2 283 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 AdssP46664 456 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rftn2Q8CHX7 500 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sgf29Q9DA08 293 aaKnown RBP16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Scube2Q9JJS0 997 aa16■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mmp15O54732 657 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 NficP70255 439 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Mib1Q80SY4 1006 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fbxo43Q8CDI2 640 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Vps37aQ8CHS8 397 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rps6kl1Q8R2S1 544 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Ccnd1P25322 295 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Armc7Q3UJZ3 198 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr1057Q7TR75 315 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Vgll2Q8BGW8 322 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Dedd2Q8QZV0 330 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Olfr30Q8VGD8 315 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Slc12a9Q99MR3 914 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Igdcc4Q9EQS9 1252 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Rnf25Q9QZR0 456 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Nphs1Q9QZS7 1256 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Gm21964A0A1W2P7S4 437 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 PotegA5H0M4 473 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Fgfr1P16092 822 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Glud1P26443 558 aaKnown RBP15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 NogP97466 232 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tfap2bQ61313 459 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pcmtd2Q8BHD8 359 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Psmd12Q9D8W5 456 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 XkQ9QXY7 446 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Net1Q9Z206 595 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Kat6bQ8BRB7 1872 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Serpinb2P12388 415 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 SpdyaQ5IBH7 310 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pcsk9Q80W65 694 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 ClmnQ8C5W0 1052 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 CarfQ8VHI4 689 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Oxct1Q9D0K2 520 aaKnown RBP15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Batf3Q9D275 118 aa15.99■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 VegfaQ00731 214 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 KhsrpQ3U0V1 748 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Slc26a2Q62273 739 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sarm1Q6PDS3 724 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 ThtpaQ8JZL3 224 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 AmotQ8VHG2 1126 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmed10Q9D1D4 219 aaKnown RBP15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Htra2Q9JIY5 458 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Myh4Q5SX39 1939 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Epb41l4aP52963 686 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Irf3P70671 419 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Cdk16Q04735 496 aa15.98■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Plk1Q07832 603 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms