RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Ass1P16460 412 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Elk3P41971 409 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cyth2P63034 400 aaKnown RBP11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 NogP97466 232 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 1810049J17RikQ3V2G9 153 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Heatr9Q5QNV8 569 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Trim38Q5SZ99 471 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cln3Q61124 438 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rbl2Q64700 1135 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Ankrd6Q69ZU8 712 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Dennd2cQ6P9P8 914 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Zfp263Q8CF60 680 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tspan8Q8R3G9 235 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Pcdha3Q91Y16 942 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Map4k3Q99JP0 894 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rec114Q9CWH4 259 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Fam212aQ9CX62 282 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Megf6Q80V70 1572 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Dhtkd1A2ATU0 921 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Krt90E9Q1Z0 538 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tekt5G5E8A8 557 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cdh16O88338 830 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 MafP54843 370 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Irf3P70671 419 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Fam83hQ148V8 1209 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Gcnt3Q5JCT0 437 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tpp2Q64514 1262 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rad9bQ6WBX7 403 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Arhgap29Q8CGF1 1266 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Colgalt1Q8K297 617 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Olfr532Q8VGT4 309 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rgs17Q9QZB0 210 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 TfgQ9Z1A1 397 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Znf318Q99PP2 2237 aa11.13□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Ythdf1P59326 559 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Elf3Q3UPW2 391 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 FAM120AQ6A0A9 1112 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Mib1Q80SY4 1006 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Ip6k2Q80V72 448 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Chn2Q80XD1 332 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rbm12b1Q80YR9 836 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 TwnkQ8CIW5 685 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tceal1Q921P9 165 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Grk2Q99MK8 689 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Nt5c3aQ9D020 331 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Atp6v1c1Q9Z1G3 382 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Olfr310B2RVZ1 332 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Gm8113E0CXS8 587 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 F6Y6L6 278 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 LgmnO89017 435 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Serping1P97290 504 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Npas2P97460 816 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Slc17a7Q3TXX4 560 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tmem65Q4VAE3 234 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cyb5d1Q5NCY3 228 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Orc2Q60862 576 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cntn2Q61330 1040 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 SnrpaQ62189 287 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Senp5Q6NXL6 749 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rad54bQ6PFE3 886 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Ccnt2Q7TQK0 723 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Polr2eQ80UW8 210 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Q8BGA7 448 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Znf784Q8BI69 297 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Ccdc40Q8BI79 1192 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Wdr60Q8C761 999 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Zdhhc3Q8R173 299 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 GhdcQ99J23 532 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Subh2bvQ9D9Z7 123 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rassf7Q9DD19 359 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Copg2Q9QXK3 871 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tmem59Q9QY73 323 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cdc42ep5Q9Z0X0 150 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Akap1O08715 857 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Msx3P70354 204 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tp53i13Q5F267 385 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Vps72Q62481 368 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Wdtc1Q80ZK9 677 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Olfr30Q8VGD8 315 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 CoprsQ9CQ13 173 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tmem68Q9D850 329 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Riok3Q9DBU3 519 aaKnown RBP11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Cpsf3Q9QXK7 684 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tnfrsf10bQ9QZM4 381 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Plod1Q9R0E2 728 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tnfsf13bQ9WU72 309 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Sbf2E9PXF8 1872 aa11.12□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Rhox3fA2ANE1 215 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tubb1A2AQ07 451 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Tespa1Q3U132 458 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Znf148Q61624 794 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Atp4aQ64436 1033 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Plekha4Q8VC98 588 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Pcdhgb1Q91XX8 918 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Sntg2Q925E0 539 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 1700123K08RikQ9D991 295 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Gm10250G3X9L6 160 aaKnown RBP11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Clk2O35491 499 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Trdmt1O55055 415 aa11.11□□□□□ -0.63
Col9a1-201ENSMUST00000054588 Gad2P48320 585 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms