RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 FtcdQ91XD4 541 aa12.24□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slxl1Q9D515 155 aa12.24□□□□□ -0.45
Pcif1-201ENSMUST00000041643 LrgukQ9D5S7 820 aa12.24□□□□□ -0.45
Pcif1-201ENSMUST00000041643 IscuQ9D7P6 168 aa12.24□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sf3b1Q99NB9 1304 aaKnown RBP12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Kif5aP33175 1027 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tubgcp3P58854 905 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 PrkczQ02956 592 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Yipf3Q3UDR8 347 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Chi3l1Q61362 389 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ntan1Q64311 310 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 B3glctQ8BHT6 489 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Agr3Q8R3W7 165 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 2010005H15RikQ9D8D6 97 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Fads3Q9JJE7 449 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 PigoQ9JJI6 1093 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 SprtnG3X912 497 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp2c38P56655 490 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Emilin3P59900 758 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pik3r6Q3U6Q4 756 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Myo1dQ5SYD0 1006 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 March8Q9DBD2 286 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Lama4P97927 1816 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cyp2b23E9Q593 491 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Vmn2r15L7N2A0 855 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pou4f1P17208 421 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Map3k7Q62073 579 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Hmgb4Q6P8W9 181 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tmem270Q6UJB9 264 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Dnali1Q8BVN8 258 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Trmt13Q8BYH3 481 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Wdr60Q8C761 999 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 SncaipQ99ME3 962 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Psmd12Q9D8W5 456 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cul3Q9JLV5 768 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tcp11x2A2AEI7 503 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Prpmp5E9PXN1 296 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 1700024B05RikE9Q6D7 167 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 G430095P16RikE9Q913 147 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gp1bbP56400 206 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Samd11Q1RNF8 542 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rufy4Q3TYX8 563 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Arhgap44Q5SSM3 814 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Usp6nlQ80XC3 819 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Olfr385Q8VGT1 312 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Vangl2Q91ZD4 521 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Acot13Q9CQR4 140 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sppl3Q9CUS9 384 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Serbp1Q9CY58 407 aaKnown RBP12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Spag6Q9JLI7 507 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Wnt8bQ9WUD6 350 aa12.23□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pgap3A2A559 320 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Clk2O35491 499 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sept4P28661 478 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 PorP37040 678 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 IdsQ08890 552 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Alkbh8Q80Y20 664 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 H2-Q4Q8HWB2 354 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zkscan3Q91VW9 553 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 PignQ9R1S3 931 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zfp839E9PUU5 921 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Rgs4O08899 205 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Pdcd2P46718 343 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tex11Q14AT2 947 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 E2f7Q6S7F2 904 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Foxo6Q70KY4 559 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 R3hdm2Q80TM6 1044 aaKnown RBP12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Chn2Q80XD1 332 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Catsper1Q91ZR5 686 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Chst12Q99LL3 419 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gemin2Q9CQQ4 269 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Dgcr8Q9EQM6 773 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ing2Q9ESK4 281 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Gm20721E9Q2U8 318 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Brcc3P46737 291 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mc4rP56450 332 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cdh9P70407 786 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mansc4Q3UU94 337 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Mon1aQ6PDG8 556 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ccdc90bQ8C3X2 256 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Cog2Q921L5 731 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 CatsperzQ9CQP8 194 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Olfr1305A2AVW3 312 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Hnrnph3D3Z3N4 346 aaKnown RBP12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Zfp212G3X8R7 492 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Tnfrsf11aO35305 625 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 E2f6O54917 272 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Hsd17b7O88736 334 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Fam91a1Q3UVG3 837 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Sco1Q5SUC9 284 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Ddx4Q61496 702 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Grik5Q61626 979 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Klra3Q64329 266 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Arl5cQ6P068 179 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Slc45a1Q8BIV7 751 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Aldh5a1Q8BWF0 523 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Fbxl5Q8C2S5 690 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 Itm2cQ91VK4 269 aa12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 NgrnQ99KS2 293 aaKnown RBP12.22□□□□□ -0.45
Pcif1-201ENSMUST00000041643 CinpQ9D0V8 212 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms