RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Fam167bP17257 162 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 BrafP28028 804 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cst8P32766 142 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nfe2Q07279 373 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cul4aQ3TCH7 759 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nr1d2Q60674 576 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rusc1Q8BG26 893 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 ClyblQ8R4N0 338 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Map3k20Q9ESL4 802 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ptk2bQ9QVP9 1009 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm3752A6NAT4 150 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 FaahO08914 579 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gria1P23818 907 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Traf2P39429 501 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pik3r5Q5SW28 871 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dync1li2Q6PDL0 492 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Serpina3bQ8BYY9 420 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ergic2Q9CR89 377 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam227aQ9D3V8 625 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Lima1Q9ERG0 753 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Bmp15Q9Z0L4 392 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mtmr9Q9Z2D0 545 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Prdm2A2A7B5 1709 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Abca8aQ8K442 1620 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Osbpl8B9EJ86 889 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm7535F7CXE4 302 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hk1P17710 974 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zc3hav1Q3UPF5 946 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tmem237Q3V0J1 427 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Scara3Q8C850 606 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Trex1Q91XB0 314 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fastkd2Q922E6 689 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Asb11Q9CQ31 323 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mettl16Q9CQG2 553 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Krtap5-3Q9D226 196 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Spata1Q9D5R4 444 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc13a2Q9ES88 586 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm44511A0A0N4SW10 223 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r63E9Q0K5 859 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm9268E9Q0M3 861 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r62K7N712 859 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kcnu1O54982 1121 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc9b2Q5BKR2 547 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Orai3Q6P8G8 290 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Smndc1Q8BGT7 238 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Plbd1Q8VCI0 550 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Necab2Q91ZP9 389 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam32aQ9CR80 112 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mrps15Q9DC71 258 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kcnh7Q9ER47 1195 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm5737A0A140LI11 423 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dennd5bA2RSQ0 1274 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 InvsO89019 1062 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Smcr8Q3UMB5 935 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Krt76Q3UV17 594 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Shroom1Q5SX79 823 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam169aQ5XG69 665 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Klra7Q60654 280 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cfap206Q6PE87 622 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Psrc1Q9D0P7 329 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r46L7N282 809 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r39L7N2E5 861 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Prl2c2P04095 224 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cyp2d9P11714 504 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cyp2b9P12790 491 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AmhP27106 555 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tuba4aP68368 448 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rab26Q504M8 260 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mapkap1Q8BKH7 522 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Snx16Q8C080 344 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 OgtQ8CGY8 1046 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Smyd2Q8R5A0 433 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PnkpQ9JLV6 522 aaKnown RBP10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AadatQ9WVM8 425 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 4930444G20RikD3Z741 495 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr1354E9Q5G9 310 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zfp105G3X9I0 524 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Il4i1O09046 630 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PrkceP16054 737 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gabrb2P63137 512 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ifit3Q64345 403 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Thap3Q8BJ25 218 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Klhl31Q8BWA5 634 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rnf219Q8K2Y0 722 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Snap47Q8R570 413 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Trpc5Q9QX29 975 aa10.41□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ttll9A2APC3 461 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Epb41l4aP52963 686 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pcsk1P63239 753 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rnf145Q5SWK7 663 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Defa17Q64016 82 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 MregQ6NVG5 214 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rmdn2Q8BSE0 410 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mboat7Q8CHK3 473 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ist1Q9CX00 362 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pkp3Q9QY23 797 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm3526E9PZM0 191 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr220E9Q050 325 aa10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hsd17b4P51660 735 aaKnown RBP10.4□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cacnb3P54285 484 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms