RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 1700061G19RikQ08EE8 705 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tmem63bQ3TWI9 832 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Khdrbs1Q60749 443 aaKnown RBP8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mon1aQ6PDG8 556 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Chsy1Q6ZQ11 800 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 PdgfcQ8CI19 345 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Klhl2Q8JZP3 593 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rabep2Q91WG2 554 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Nsmce1Q9D720 266 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 PygmQ9WUB3 842 aaKnown RBP8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mbd1Q9Z2E2 636 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc73B2RWC4 316 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 PrkcdP28867 674 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Q6GQU0 248 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ccnt2Q7TQK0 723 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mapk15Q80Y86 549 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 PigxQ99LV7 254 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Trem2Q99NH8 227 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Plod1Q9R0E2 728 aa8.75□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rabgap1lA6H6A9 815 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Olfr611K7N609 323 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Olfr612L7N462 323 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fcer2P20693 331 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pdcd2P46718 343 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pld5Q3UNN8 536 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cwf19l1Q8CI33 537 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc42Q8R2U7 421 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cdc26Q99JP4 85 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ilf2Q9CXY6 390 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 MceeQ9D1I5 178 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SarnpQ9D1J3 210 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Chordc1Q9D1P4 331 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rnf14Q9JI90 485 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ddx21Q9JIK5 851 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rfx5Q9JL61 658 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ccdc194A0A140LIT1 234 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 4930469K13RikA0A286YDB2 92 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Stam2O88811 523 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ephb2P54763 986 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sh3bp2Q06649 559 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Arhgap45Q3TBD2 1116 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 EfsQ64355 560 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Snx17Q8BVL3 470 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 PygbQ8CI94 843 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Atpaf2Q91YY4 289 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fuca2Q99KR8 461 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Nsmce3Q9CPR8 279 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rfc5Q9D0F6 339 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Serpina1fQ9DCQ7 411 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Kdelc1Q9JHP7 502 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ror1Q9Z139 937 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cyp2b9P12790 491 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cyp2b10P12791 500 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rplp2P99027 115 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gbp9Q8BTS3 619 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Abhd8Q8R0P8 439 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rrp15Q9CYX7 281 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Serpinb3cA2RSF9 386 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Smok3aC0HKC8 504 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Smok3bC0HKC9 504 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Arhgef26D3YYY8 869 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Krt90E9Q1Z0 538 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SpibO35906 267 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Chrna1P04756 457 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Akr1b7P21300 316 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Crnkl1P63154 690 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 NxnP97346 435 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gcnt3Q5JCT0 437 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SowahaQ8BLS7 548 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Kank2Q8BX02 843 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 EtfbQ9DCW4 255 aaKnown RBP8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Erap1Q9EQH2 930 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lcn6A2AJB9 181 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 TroapB7ZNG4 668 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Casp2P29594 452 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 GemP55041 295 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fam47cQ14BE7 430 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Wee2Q66JT0 555 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Vmn2r26Q6TAC4 855 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rassf6Q80UQ2 353 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pcsk9Q80W65 694 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cyp2d26Q8CIM7 500 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Unc93b1Q8VCW4 598 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Alg9Q8VDI9 611 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pcdha1Q91Y21 948 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ddit4Q9D3F7 229 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Slc25a19Q9DAM5 318 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc46Q9DAP0 323 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Apobec2Q9WV35 224 aa8.74□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zc3h4Q6ZPZ3 1304 aaKnown RBP8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zfp957Q3UT76 567 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Otol1Q4ZJM7 482 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Slc9b2Q5BKR2 547 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Adgre1Q61549 931 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Wdr60Q8C761 999 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 GarsQ9CZD3 729 aaKnown RBP8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tubgcp4Q9D4F8 667 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cdc42ep5Q9Z0X0 150 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm281D3Z1Y0 860 aa8.73□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Olfr743L7N1Y2 311 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms