RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 LMO3Q8TAP4 145 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 BAHD1Q8TBE0 780 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-225ENST00000641720 OSCP1Q8WVF1 389 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 KBTBD7Q8WVZ9 684 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 RLN3Q8WXF3 142 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 PIGKQ92643 395 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 ACDQ96AP0 544 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 SENP8Q96LD8 212 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 MYRFLQ96LU7 910 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 MRPL45Q9BRJ2 306 aaKnown RBP7.86□□□□□ -1.15
PHGDH-225ENST00000641720 TUBGCP2Q9BSJ2 902 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 SCUBE2Q9NQ36 999 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 TOR4AQ9NXH8 423 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 GDAP2Q9NXN4 497 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 MAGEC2Q9UBF1 373 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-225ENST00000641720 HMGXB4Q9UGU5 601 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 ZMYM5Q9UJ78 669 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 COQ4Q9Y3A0 265 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 NME7Q9Y5B8 376 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 SNX9Q9Y5X1 595 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 WNT6Q9Y6F9 365 aa7.86□□□□□ -1.15
PHGDH-225ENST00000641720 UNC79Q9P2D8 2635 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 TLN1Q9Y490 2541 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 A0A0A0MRY4 1105 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 SGK1O00141 431 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 CYB561D2O14569 222 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 NOL4O94818 638 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 CLSTN1O94985 981 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ODC1P11926 461 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ITPKAP23677 461 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 DDX6P26196 483 aaKnown RBP eCLIP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ATICP31939 592 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 MYO1EQ12965 1108 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 CAMK2BQ13554 666 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 PDGFRLQ15198 375 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 WDR72Q3MJ13 1102 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 SLC39A12Q504Y0 691 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ARHGAP15Q53QZ3 475 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF667Q5HYK9 610 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 SLCO6A1Q86UG4 719 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ITIH5Q86UX2 942 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 C11orf74Q86VG3 221 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 C12orf40Q86WS4 652 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 SYT12Q8IV01 421 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 SLC41A1Q8IVJ1 513 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ARHGEF19Q8IW93 802 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 TMEFF1Q8IYR6 380 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 ADGRF2Q8IZF7 708 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 IL17RCQ8NAC3 791 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 FBXL13Q8NEE6 735 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 TSTD1Q8NFU3 115 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 MDM1Q8TC05 714 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 GIPC2Q8TF65 315 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 TRMT2BQ96GJ1 504 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 CAMK1GQ96NX5 476 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 CRACR2AQ9BSW2 395 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 NIF3L1Q9GZT8 377 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 INTS2Q9H0H0 1204 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 VPS16Q9H269 839 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 LINC00597Q9H2U6 94 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 NDST4Q9H3R1 872 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 VRTNQ9H8Y1 702 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 RAB20Q9NX57 234 aa7.85□□□□□ -1.15
PHGDH-225ENST00000641720 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 LIMA1Q9UHB6 759 aaKnown RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 AJAP1Q9UKB5 411 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-225ENST00000641720 KIF26BQ2KJY2 2108 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 SMTNL1A8MU46 457 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 LGALS16A8MUM7 142 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 BECN2A8MW95 431 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 H0Y626 953 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 PMM2O15305 246 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 HUS1O60921 280 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TRIM16O95361 564 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 OLFM2O95897 454 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 PAX3P23760 479 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 ACAT1P24752 427 aaKnown RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 GBP1P32455 592 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 HOXD12P35452 270 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 MAPK8P45983 427 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 DHPSP49366 369 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 COPB1P53618 953 aaKnown RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 CDH8P55286 799 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TNNC1P63316 161 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 LMAN2Q12907 356 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 LRMPQ12912 555 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 ORC1Q13415 861 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 SGSM1Q2NKQ1 1148 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 USP39Q53GS9 565 aaKnown RBP7.84□□□□□ -1.15
PHGDH-225ENST00000641720 SPDYCQ5MJ68 293 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 DPY19L2P1Q6NXN4 242 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TRIM65Q6PJ69 517 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 GLRX5Q86SX6 157 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 GAS2L3Q86XJ1 694 aa7.84□□□□□ -1.15
PHGDH-225ENST00000641720 TOP6BLQ8N6T0 577 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms