RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 HLTFQ14527 1009 aaKnown RBP eCLIP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 PPP1R7Q15435 360 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 DPYSL2Q16555 572 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 FAM153CQ494X1 144 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 DRICH1Q6PGQ1 229 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 RNF19BQ6ZMZ0 732 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 HDXQ7Z353 690 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 CMTR2Q8IYT2 770 aaKnown RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 STKLD1Q8NE28 680 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 GRK7Q8WTQ7 553 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 CCDC114Q96M63 670 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 ZNF558Q96NG5 402 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 RNF157Q96PX1 679 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 MAK16Q9BXY0 300 aaKnown RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 DHX35Q9H5Z1 703 aaKnown RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 PIGVQ9NUD9 493 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 FAM153AQ9UHL3 310 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 FEZ2Q9UHY8 353 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 SNX24Q9Y343 169 aa18.99■□□□□ 0.63
PHGDH-209ENST00000641074 MRPL42Q9Y6G3 142 aaKnown RBP18.99■□□□□ 0.63
PHGDH-209ENST00000641074 DRG2P55039 364 aaKnown RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 BYSLQ13895 437 aaKnown RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 PPP6R3Q5H9R7 873 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 EMBQ6PCB8 327 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SND1Q7KZF4 910 aaKnown RBP eCLIP18.98■□□□□ 0.631e-7■■■■□ 19.4
PHGDH-209ENST00000641074 SLC39A11Q8N1S5 342 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 RIN2Q8WYP3 895 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 NEUROG2Q9H2A3 272 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 CRISPLD1Q9H336 500 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 MTRRQ9UBK8 725 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 FZD10Q9ULW2 581 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SLC27A5Q9Y2P5 690 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 CDY1Q9Y6F8 540 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 COL4A4P53420 1690 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 MAP2K7O14733 419 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 ADAM12O43184 909 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 RPL21P46778 160 aaKnown RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 PGFP49763 221 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 YWHAGP61981 247 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 OTUD4Q01804 1114 aaKnown RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SMARCB1Q12824 385 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 CASP8Q14790 479 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 ANKRD20A8PQ5CZ79 823 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SYDE1Q6ZW31 735 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 VSIG1Q86XK7 387 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 NUP93Q8N1F7 819 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 TTC13Q8NBP0 860 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 FBXO22Q8NEZ5 403 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 ACTL9Q8TC94 416 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SPPL2BQ8TCT7 592 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 CAVIN3Q969G5 261 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 PGAP3Q96FM1 320 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 KCTD15Q96SI1 283 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-209ENST00000641074 ZNF670Q9BS34 389 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 RRN3Q9NYV6 651 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 NEU2Q9Y3R4 380 aa18.98■□□□□ 0.63
PHGDH-209ENST00000641074 SOAT2O75908 522 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 GAS8O95995 478 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 VCPP55072 806 aaKnown RBP18.97■□□□□ 0.63
PHGDH-209ENST00000641074 TFDP2Q14188 446 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 OASLQ15646 514 aaKnown RBP18.97■□□□□ 0.63
PHGDH-209ENST00000641074 PSMD5Q16401 504 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 SLC8B1Q6J4K2 584 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 BEND5Q7L4P6 421 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 SCD5Q86SK9 330 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 PQLC3Q8N755 202 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 COLGALT1Q8NBJ5 622 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 PCDH19Q8TAB3 1148 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 SLC35B2Q8TB61 432 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 PIK3R5Q8WYR1 880 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 BADQ92934 168 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 NKD2Q969F2 451 aaPredicted RBP18.97■□□□□ 0.63
PHGDH-209ENST00000641074 FAF2Q96CS3 445 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 YME1L1Q96TA2 773 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 TRIM62Q9BVG3 475 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 WDR6Q9NNW5 1121 aaKnown RBP18.97■□□□□ 0.63
PHGDH-209ENST00000641074 TMPRSS4Q9NRS4 437 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 DDIT4Q9NX09 232 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 PRKAG2Q9UGJ0 569 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 BACE2Q9Y5Z0 518 aa18.97■□□□□ 0.63
PHGDH-209ENST00000641074 APOC4-APOC2K7ER74 178 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 APOC2P02655 101 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 SOD2P04179 222 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 PECAM1P16284 738 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-209ENST00000641074 RPL17P18621 184 aaKnown RBP18.96■□□□□ 0.63
PHGDH-209ENST00000641074 LAG3P18627 525 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 PTK6Q13882 451 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 KIAA1841Q6NSI8 718 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 ZNF365Q70YC5 407 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 PSTKQ8IV42 348 aaKnown RBP18.96■□□□□ 0.63
PHGDH-209ENST00000641074 PYROXD2Q8N2H3 581 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 GPR152Q8TDT2 470 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 TMEM169Q96HH4 297 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 SLC9A7Q96T83 725 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 FRMD8P1Q9BZ68 369 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-209ENST00000641074 FAM204AQ9H8W3 233 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 GRHL1Q9NZI5 618 aa18.96■□□□□ 0.63
PHGDH-209ENST00000641074 SCML2Q9UQR0 700 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms