RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CNPY3Q9BT09 278 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 NUP85Q9BW27 656 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SMOC2Q9H3U7 446 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SYNCQ9H7C4 482 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 TMEM51Q9NW97 253 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 HCFC1R1Q9NWW0 138 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 TRIM10Q9UDY6 481 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 LCMT1Q9UIC8 334 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 UNC80Q8N2C7 3258 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 MYO16Q9Y6X6 1858 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 GOLGA8SH3BPF8 625 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ZSCAN12O43309 604 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 IGLV3-27P01718 113 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SRGAP2BP0DMP2 458 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 DDX6P26196 483 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CDC25CP30307 473 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 PITX1P78337 314 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ACAP1Q15027 740 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SLC5A9Q2M3M2 681 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SLC25A52Q3SY17 297 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CYP4V2Q6ZWL3 525 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 PHLDB2Q86SQ0 1253 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 KIAA1328Q86T90 577 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 DEFB106AQ8N104 65 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ELMOD1Q8N336 334 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 EMC1Q8N766 993 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 DQX1Q8TE96 717 aaKnown RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 RXFP2Q8WXD0 754 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SMG7Q92540 1137 aaKnown RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CD101Q93033 1021 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 TCEAL4Q96EI5 215 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SLC39A13Q96H72 371 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 FAM161BQ96MY7 647 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 MCEEQ96PE7 176 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CORO1BQ9BR76 489 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 SELENOOQ9BVL4 669 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 WDR6Q9NNW5 1121 aaKnown RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ASAH2Q9NR71 780 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 METTL5Q9NRN9 209 aaKnown RBP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCARB2-225ENST00000640900 TRPM5Q9NZQ8 1165 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 MYO1AQ9UBC5 1043 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 ZMYM5Q9UJ78 669 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 NAALADL1Q9UQQ1 740 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 DENND4AQ7Z401 1863 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 CLUHO75153 1309 aa9.53□□□□□ -0.88
SCARB2-225ENST00000640900 DOCK8Q8NF50 2099 aa9.52□□□□□ -0.88
SCARB2-225ENST00000640900 FAM170AA1A519 330 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GRID2IPA4D2P6 1211 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GOLGA6L9A6NEM1 432 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 MYO1FO00160 1098 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 ZNF197O14709 1029 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 COCHO43405 550 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 KRT86O43790 486 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GREM1O60565 184 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 BUB1BO60566 1050 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 TLR5O60602 858 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GRAP2O75791 330 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 PROSCO94903 275 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 RARGP13631 454 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 TCF3P15923 654 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 PDGFRAP16234 1089 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 TFE3P19532 575 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GPD1P21695 349 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 IGFBP4P22692 258 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GABRR2P28476 465 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 PCK1P35558 622 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 CXCR3P49682 368 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 HDAC4P56524 1084 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 SLC7A9P82251 487 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 PIGHQ14442 188 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 DCAF6Q58WW2 860 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 RARS2Q5T160 578 aaKnown RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 C11orf63Q6NUN7 778 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 TMC5Q6UXY8 1006 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 GRASPQ7Z6J2 395 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 KIAA1958Q8N8K9 716 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 ADAMTS19Q8TE59 1207 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 CDK5RAP1Q96SZ6 601 aaKnown RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 RNF38Q9H0F5 515 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 CCSER2Q9H7U1 834 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 OLA1Q9NTK5 396 aaKnown RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 CTTNBP2NLQ9P2B4 639 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 IP6K2Q9UHH9 426 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 ANAPC7Q9UJX3 599 aa9.52□□□□□ -0.89
SCARB2-225ENST00000640900 MAGED2Q9UNF1 606 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-225ENST00000640900 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 C2orf78A6NCI8 922 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 KCNU1A8MYU2 1149 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 I6L893 689 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 IRAK2O43187 625 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 CCP110O43303 1012 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 LRCH4O75427 683 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms