RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ZC3H11AO75152 810 aaKnown RBP eCLIP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 FGF3P11487 239 aaPredicted RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 POLD2P49005 469 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 RAB32Q13637 225 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 ZNF329Q86UD4 541 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 COL23A1Q86Y22 540 aaPredicted RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 SPATA2LQ8IUW3 424 aaPredicted RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 CHPFQ8IZ52 775 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 IQCF1Q8N6M8 205 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 PNPLA1Q8N8W4 532 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 SLC44A5Q8NCS7 719 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 NGDNQ8NEJ9 315 aaKnown RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 OR56A3Q8NH54 315 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 PIGKQ92643 395 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 MSI2Q96DH6 328 aaKnown RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 C1GALT1C1Q96EU7 318 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 PPP1R9BQ96SB3 815 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 TUBB6Q9BUF5 446 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 NKX1-2Q9UD57 310 aaPredicted RBP4.2□□□□□ -1.74
AP3S1-209ENST00000640413 COL4A3BPQ9Y5P4 624 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 A0A1W2PPL8 197 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 PRSS47A8MTI9 375 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 GRID2O43424 1007 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 CA12O43570 354 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 PGDP52209 483 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 ZNF267Q14586 743 aaPredicted RBP4.19□□□□□ -1.74
AP3S1-209ENST00000640413 INSCQ1MX18 579 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 ATAT1Q5SQI0 421 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 FAM71DQ8N9W8 422 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 BCAS4Q8TDM0 211 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 OIT3Q8WWZ8 545 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 MAML1Q92585 1016 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 ANAPC4Q9UJX5 808 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 RIMKLBQ9ULI2 386 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 PCDHA7Q9UN72 937 aa4.19□□□□□ -1.74
AP3S1-209ENST00000640413 TRBV5-3A0A0A0MS03 114 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 A8MVJ9 347 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 F8W810 466 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 RRP9O43818 475 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 UGDHO60701 494 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 CAMTA2O94983 1202 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 PARP1P09874 1014 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 RPS6KB1P23443 525 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 ADRA1DP25100 572 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 PTDSS1P48651 473 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 TXNL4AP83876 142 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 LTBQ06643 244 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 MTA1Q13330 715 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 JPH3Q8WXH2 748 aaPredicted RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 SPSB4Q96A44 273 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 RBM38Q9H0Z9 239 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 ZMAT3Q9HA38 289 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 MOV10Q9HCE1 1003 aaKnown RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 SEMA5BQ9P283 1151 aa4.18□□□□□ -1.74
AP3S1-209ENST00000640413 ERRFI1Q9UJM3 462 aaPredicted RBP4.18□□□□□ -1.74
AP3S1-209ENST00000640413 A0A0G2JK05 382 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 TNFRSF13BO14836 293 aaPredicted RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 ATG13O75143 517 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 CD19P15391 556 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 ST6GAL1P15907 406 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 NCLP19338 710 aaKnown RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 TBXAS1P24557 533 aaPredicted RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 HTR1BP28222 390 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 NTSR1P30989 418 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 GALNSP34059 522 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 JAK3P52333 1124 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 SLC12A2P55011 1212 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 RRP1P56182 461 aaKnown RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 STK3Q13188 491 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 KEAP1Q14145 624 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 FBXL22Q6P050 247 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 PDXDC1Q6P996 788 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 USP49Q70CQ1 688 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 DAAM2Q86T65 1068 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 FOXP4Q8IVH2 680 aaPredicted RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 ZCRB1Q8TBF4 217 aaKnown RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 PRR11Q96HE9 360 aaPredicted RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 ZNF518BQ9C0D4 1074 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 PCDH12Q9NPG4 1184 aa4.17□□□□□ -1.74
AP3S1-209ENST00000640413 A1CFQ9NQ94 594 aaKnown RBP4.17□□□□□ -1.74
AP3S1-209ENST00000640413 EVPLQ92817 2033 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 LOC102723971A0A1B0GUV8 181 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 SPTLC2O15270 562 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 AKAP10O43572 662 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 AP1G1O43747 822 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 PIAS2O75928 621 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 PAPSS2O95340 614 aaPredicted RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 MBPP02686 304 aaPredicted RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 IDUAP35475 653 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 MLH1P40692 756 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 HILS1P60008 231 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 RPL36AP83881 106 aaKnown RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 RBM44Q6ZP01 1051 aaKnown RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 ADGRF4Q8IZF3 695 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 DIS3LQ8TF46 1054 aaKnown RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 WBP1Q96G27 269 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 VPS50Q96JG6 964 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms