RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 MYCBPAPQ8TBZ2 947 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 MRPS31Q92665 395 aaKnown RBP5.89□□□□□ -1.47
RTTN-218ENST00000640408 PPWD1Q96BP3 646 aaKnown RBP5.89□□□□□ -1.47
RTTN-218ENST00000640408 ZFRQ96KR1 1074 aaKnown RBP5.89□□□□□ -1.47
RTTN-218ENST00000640408 ZNF512Q96ME7 567 aaPredicted RBP5.89□□□□□ -1.47
RTTN-218ENST00000640408 TLE6Q9H808 572 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 DMAC2Q9NW81 257 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 CEP72Q9P209 647 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 CDH9Q9ULB4 789 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 AP4S1Q9Y587 144 aa5.89□□□□□ -1.47
RTTN-218ENST00000640408 GPR32O75388 356 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 STAU1O95793 577 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 FESP07332 822 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 PAEPP09466 180 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 FGFR4P22455 802 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CASP1P29466 404 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 MAGEA10P43363 369 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 CARSP49589 748 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 ARPP19P56211 112 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TMED2Q15363 201 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 FIGNQ5HY92 759 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 MARCH8Q5T0T0 291 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 E4F1Q66K89 784 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 WDR93Q6P2C0 686 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TUBA3EQ6PEY2 450 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 DCUN1D2Q6PH85 259 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 VSTM1Q6UX27 236 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CDR2LQ86X02 465 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 GSPT2Q8IYD1 628 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 RBBP8NLQ8NC74 664 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 RIN2Q8WYP3 895 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 SNX27Q96L92 541 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ERGIC2Q96RQ1 377 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 GPR88Q9GZN0 384 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CAAP1Q9H8G2 361 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 WARS2Q9UGM6 360 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 FBXO9Q9UK97 447 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 PCDHB8Q9UN66 801 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TMED5Q9Y3A6 229 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 GOLGA8RI6L899 631 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 SMAPO00193 183 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CSDE1O75534 798 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 WBP4O75554 376 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 AGTP01019 485 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CALB1P05937 261 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BMPR1AP36894 532 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 MARSP56192 900 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 RAB14P61106 215 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 KRT31Q15323 416 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ECM1Q16610 540 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 WASHC2DQ5SRD0 308 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BSNDQ8WZ55 320 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TIFAQ96CG3 184 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 FUBP3Q96I24 572 aaKnown RBP eCLIP5.88□□□□□ -1.47
RTTN-218ENST00000640408 DACH2Q96NX9 599 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CCT7Q99832 543 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ZNF518BQ9C0D4 1074 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BRD8Q9H0E9 1235 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 INTS2Q9H0H0 1204 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 FBXO44Q9H4M3 255 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CCDC134Q9H6E4 229 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 UBE2TQ9NPD8 197 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 FAM207AQ9NSI2 230 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 APEX2Q9UBZ4 518 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 A0A087X0B3 334 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TMEM189-UBE2V1I3L0A0 370 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ASNA1O43681 348 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 FBXO21O94952 628 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 GLUD1P00367 558 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 HOXB8P17481 243 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 GJC1P36383 396 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 WDR5P61964 334 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 CNGA3Q16281 694 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 PSMD5Q16401 504 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 GEN1Q17RS7 908 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 FUT10Q6P4F1 479 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 B3GNT6Q6ZMB0 384 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 ADCK1Q86TW2 530 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 SCN4BQ8IWT1 228 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CCT6BQ92526 530 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 RIPOR3Q96MK2 946 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 NXF3Q9H4D5 531 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 TBC1D13Q9NVG8 400 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 RRN3Q9NYV6 651 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 WRAP73Q9P2S5 460 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 DNAJC12Q9UKB3 198 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 BARX2Q9UMQ3 279 aaPredicted RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
RTTN-218ENST00000640408 O00370 1275 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 GUCY1B2O75343 617 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CXCL14O95715 111 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 H2AFZP0C0S5 128 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TRIM49P0CI25 452 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 TRIM49CP0CI26 452 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CSH1P0DML2 217 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 CSH2P0DML3 217 aa5.88□□□□□ -1.47
RTTN-218ENST00000640408 IGFBP4P22692 258 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms