RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KLF16Q9BXK1 252 aaPredicted RBP13.81□□□□□ -0.2
GTF3A-209ENST00000640289 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ASNSD1Q9NWL6 643 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
GTF3A-209ENST00000640289 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 DOCK8Q8NF50 2099 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 SSU72P8A0A1W2PR75 194 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 CAPN9O14815 690 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 MSI1O43347 362 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 HSF2BPO75031 334 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 CALB1P05937 261 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 HMBSP08397 361 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 GZMAP12544 262 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 PSMC3P17980 439 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 GFPT1Q06210 699 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 ASTE1Q2TB18 679 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 ADAM32Q8TC27 787 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 DQX1Q8TE96 717 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 NXPE3Q969Y0 559 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 E2F7Q96AV8 911 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 ZFYVE19Q96K21 471 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 METTL5Q9NRN9 209 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 OLA1Q9NTK5 396 aaKnown RBP13.8□□□□□ -0.2
GTF3A-209ENST00000640289 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 MARCH2Q9P0N8 246 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 C5orf42Q9H799 3197 aa13.8□□□□□ -0.2
GTF3A-209ENST00000640289 RTN2O75298 545 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 DAB1O75553 588 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 GLI1P08151 1106 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 TCF3P15923 654 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 RRM1P23921 792 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 FLT3P36888 993 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 SCNN1AP37088 669 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 GSCP56915 257 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-209ENST00000640289 CDK17Q00537 523 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 FCHO2Q0JRZ9 810 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 TDGQ13569 410 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 MTF1Q14872 753 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 DCAF6Q58WW2 860 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 TRNP1Q6NT89 227 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 MSANTD2Q6P1R3 559 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 EMC1Q8N766 993 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 JOSD2Q8TAC2 188 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 DEPDC1BQ8WUY9 529 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 ASIC4Q96FT7 647 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 TRMT61BQ9BVS5 477 aaKnown RBP13.79□□□□□ -0.2
GTF3A-209ENST00000640289 ISCUQ9H1K1 167 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 STRIP2Q9ULQ0 834 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 NENFQ9UMX5 172 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 SORCS3Q9UPU3 1222 aa13.79□□□□□ -0.2
GTF3A-209ENST00000640289 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 SYNJ2BP-COX16A0A087WUM0 186 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 AKR1B10O60218 316 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 GREM1O60565 184 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 STC2O76061 302 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
GTF3A-209ENST00000640289 ABCB4P21439 1286 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 GDI1P31150 447 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 MRE11P49959 708 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 GPC5P78333 572 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 GSE1Q14687 1217 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 ALKBH5Q6P6C2 394 aaKnown RBP13.78□□□□□ -0.2
GTF3A-209ENST00000640289 BEND5Q7L4P6 421 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 TAC4Q86UU9 113 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
GTF3A-209ENST00000640289 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 LINC00597Q9H2U6 94 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.78□□□□□ -0.2
GTF3A-209ENST00000640289 COX16Q9P0S2 106 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 SH3BP1Q9Y3L3 701 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 DENND4CQ5VZ89 1909 aa13.78□□□□□ -0.2
GTF3A-209ENST00000640289 UNC80Q8N2C7 3258 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms