RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 TRIM64CA6NLI5 447 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 SPECC1L-ADORA2AF8WAN1 911 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ACKR2O00590 384 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 TP73O15350 636 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 RIPK2O43353 540 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MMP8P22894 467 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 RGS2P41220 211 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ARHGAP1Q07960 439 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 TAF5Q15542 800 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PTPN20Q4JDL3 420 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 GLRA4Q5JXX5 417 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 KIAA0319LQ8IZA0 1049 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 SIX5Q8N196 739 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MORC4Q8TE76 937 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 TMEM237Q96Q45 408 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PLVAPQ9BX97 442 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 IFT122Q9HBG6 1241 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MRPL47Q9HD33 250 aaKnown RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 TBC1D30Q9Y2I9 924 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PDHXO00330 501 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 BANF1O75531 89 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 C22orf31O95567 290 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ATF2P15336 505 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MMP13P45452 471 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 AMHR2Q16671 573 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PLEKHA7Q6IQ23 1121 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 PATL1Q86TB9 770 aaKnown RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 LRRC19Q9H756 370 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 A0A1W2PQ67 120 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 OR6B1O95007 311 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 MSLNQ13421 630 aaPredicted RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 CDO1Q16878 200 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 FAM209AQ5JX71 171 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ART4Q93070 314 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ZNF184Q99676 751 aaPredicted RBP12.85□□□□□ -0.35
SPIN3-236ENST00000640131 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 NOX1Q9Y5S8 564 aa12.85□□□□□ -0.35
SPIN3-236ENST00000640131 SCN1AP35498 2009 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 MATN2O00339 956 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 HCRTO43612 131 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 CD48P09326 243 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 ARF4P18085 180 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 RGS7P49802 495 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 NFX1Q12986 1120 aaKnown RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 KHDC1Q4VXA5 237 aaKnown RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 B3GNT6Q6ZMB0 384 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 PHF13Q86YI8 300 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 TMEM35BQ8NCS4 154 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 ANAPC5Q9UJX4 755 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 IGKV6-21A0A0C4DH24 114 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 HBP1O60381 514 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 OPHN1O60890 802 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 PSMA2P25787 234 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 EPHB2P29323 1055 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 TKTP29401 623 aaKnown RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 ZNF132P52740 706 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 TFDP1Q14186 410 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 PLPPR4Q7Z2D5 763 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 DPP9Q86TI2 863 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 VSIG1Q86XK7 387 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 EIF1ADQ8N9N8 165 aaKnown RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 FZD8Q9H461 694 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.84□□□□□ -0.35
SPIN3-236ENST00000640131 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
SPIN3-236ENST00000640131 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 TMEM191CA6NGB0 347 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 TCP11X1B4DZS4 312 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 GAS8O95995 478 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 HOXD10P28358 340 aa12.83□□□□□ -0.36
SPIN3-236ENST00000640131 NEK3P51956 506 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms