RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	CLASP2	O75122	1294 aa	Known RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	TNNC2	P02585	160 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ALOX5	P09917	674 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZNF23	P17027	643 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLC1A6	P48664	564 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SMTNL2	Q2TAL5	461 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	NIPAL1	Q6NVV3	410 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	LLGL2	Q6P1M3	1020 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	C16orf46	Q6P387	395 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	NKX2-3	Q8TAU0	364 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	PGBD4	Q96DM1	585 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SNX27	Q96L92	541 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	RUSC1	Q9BVN2	902 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	OSBPL11	Q9BXB4	747 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	AASDHPPT	Q9NRN7	309 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	CCNK	O75909	580 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ALOX12	P18054	663 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	TCEA1	P23193	301 aa	Known RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	CDK9	P50750	372 aa	Known RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	FXR2	P51116	673 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLFN11	Q7Z7L1	901 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	ARHGEF19	Q8IW93	802 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	TRPC4AP	Q8TEL6	797 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	PRR11	Q96HE9	360 aa	Predicted RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	TMEM206	Q9H813	350 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	SHOC2	Q9UQ13	582 aa		11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.7	□□□□□ -0.54
SPIN3-231	ENST00000639895	H6PD	O95479	791 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SEPHS1	P49903	392 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	DLG4	P78352	724 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PHC1	P78364	1004 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	ROR1	Q01973	937 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZNF846	Q147U1	533 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	TLR1	Q15399	786 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	DCAF12L1	Q5VU92	463 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLC47A2	Q86VL8	602 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	TCF7L2	Q9NQB0	619 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	GIT1	Q9Y2X7	761 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	COX4I1	P13073	169 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SESN2	P58004	480 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	ORC2	Q13416	577 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	TBCEL	Q5QJ74	424 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PPP2R2D	Q66LE6	453 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PAOX	Q6QHF9	649 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SYTL1	Q8IYJ3	562 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	BBS5	Q8N3I7	341 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	HNRNPAB	Q99729	332 aa	Known RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZFYVE28	Q9HCC9	887 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZSCAN5B	A6NJL1	495 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PTGES3L	E9PB15	166 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLC26A4	O43511	780 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	HSPA1A	P0DMV8	641 aa	Known RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	HSPA1B	P0DMV9	641 aa	Known RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	RALB	P11234	206 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	CETP	P11597	493 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PRDX5	P30044	214 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLC12A1	Q13621	1099 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	CDO1	Q16878	200 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	GATAD2A	Q86YP4	633 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	C12orf43	Q96C57	262 aa	Known RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	CCNL1	Q9UK58	526 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	SORCS3	Q9UPU3	1222 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	IPP	Q9Y573	584 aa		11.69	□□□□□ -0.54
SPIN3-231	ENST00000639895	KBTBD13	C9JR72	458 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	PAGE2B	Q5JRK9	111 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	CGB2	Q6NT52	195 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	NEK5	Q6P3R8	708 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	DPP8	Q6V1X1	898 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	PCDH20	Q8N6Y1	951 aa	Known RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	STARD8	Q92502	1023 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	AGAP3	Q96P47	875 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	VTA1	Q9NP79	307 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	GGA1	Q9UJY5	639 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	BAG5	Q9UL15	447 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	MINPP1	Q9UNW1	487 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	COG5	Q9UP83	839 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	SLC8A2	Q9UPR5	921 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	NCAN	O14594	1321 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	TESPA1	A2RU30	521 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	TMEM221	A6NGB7	291 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	TOR1B	O14657	336 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	FYN	P06241	537 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	GZMA	P12544	262 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	POLD3	Q15054	466 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	ABCB5	Q2M3G0	1257 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	CIAPIN1	Q6FI81	312 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	ZNF280D	Q6N043	979 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	ELMSAN1	Q6PJG2	1045 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	DHRSX	Q8N5I4	330 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	NEDD1	Q8NHV4	660 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	OLFM1	Q99784	485 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	ABCC6	O95255	1503 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	DCAF8L1	A6NGE4	600 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	AGRP	O00253	132 aa		11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	LYPLA1	O75608	230 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIN3-231	ENST00000639895	KRT19	P08727	400 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms