RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DNM2P50570 870 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 PGDP52209 483 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 SRSF6Q13247 344 aaKnown RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 VEPH1Q14D04 833 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 SHEQ5VZ18 495 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 DESI1Q6ICB0 168 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF280DQ6N043 979 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 RAB11FIP2Q7L804 512 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 TMEM145Q8NBT3 493 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 EHBP1Q8NDI1 1231 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ITLN2Q8WWU7 325 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 KIAA1143Q96AT1 154 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 OTUB2Q96DC9 234 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ORAI3Q9BRQ5 295 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ENKD1Q9H0I2 346 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 DNAJC25Q9H1X3 360 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF302Q9NR11 478 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 PCDHA12Q9UN75 941 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 COL4A3BPQ9Y5P4 624 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ACANP16112 2415 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 A0A1W2PR77 199 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 K7ELQ4 463 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 NDUFB5O43674 189 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 FAM13AO94988 1023 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 DNASE1P24855 282 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 PCSK6P29122 969 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 TPMTP51580 245 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ITGA1P56199 1179 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 SP4Q02446 784 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 CLPPQ16740 277 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 MIIPQ5JXC2 388 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 KIAA1324Q6UXG2 1013 aaKnown RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ABHD15Q6UXT9 468 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ADGRG2Q8IZP9 1017 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 IFI44Q8TCB0 444 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 C2orf15Q8WU43 125 aaKnown RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 NKD1Q969G9 470 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 CHMP4CQ96CF2 233 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 TRIT1Q9H3H1 467 aaKnown RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 IL17RBQ9NRM6 502 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 RBM28Q9NW13 759 aaKnown RBP3.78□□□□□ -1.8
CCDC7-213ENST00000639290 KCNMB2Q9Y691 235 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 DOCK9Q9BZ29 2069 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 A0A1W2PPC4 97 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 F8W810 466 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 J3QL48 77 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NTN3O00634 580 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 HOXC11O43248 304 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 LRRTM2O43300 516 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 STK10O94804 968 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NFICP08651 508 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 PAX3P23760 479 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 U2AF2P26368 475 aaKnown RBP eCLIP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CD38P28907 300 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 RECQLP46063 649 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CCR5P51681 352 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CLCN3P51790 818 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 AFF1P51825 1210 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NCBP1Q09161 790 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 SMARCB1Q12824 385 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 MTMR1Q13613 665 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 ENPP2Q13822 863 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 MYBPC2Q14324 1141 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 STXBP5Q5T5C0 1151 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NAIF1Q69YI7 327 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 DNAJB7Q7Z6W7 309 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 IQCKQ8N0W5 287 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 GSTCDQ8NEC7 633 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 SEC14L1Q92503 715 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 PRCCQ92733 491 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CCDC127Q96BQ5 260 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CITED4Q96RK1 184 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NXF3Q9H4D5 531 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 DMGDHQ9UI17 866 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 SALL4Q9UJQ4 1053 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 DBNLQ9UJU6 430 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CSNK1G3Q9Y6M4 447 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 WASF2Q9Y6W5 498 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 CHD3Q12873 2000 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 GON4LQ3T8J9 2241 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 IGKV6-21A0A0C4DH24 114 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 NEMP2A6NFY4 417 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 TSPY2A6NKD2 308 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 OR6C75A6NL08 312 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 GSG1L2A8MUP6 293 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 PHF1O43189 567 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 KLHL41O60662 606 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 ZG16O60844 167 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 FGRP09769 529 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 JMJD7P0C870 316 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 PCP11498 1178 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 LIFP15018 202 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 GUCY2CP25092 1073 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 MAP4P27816 1152 aaKnown RBP3.77□□□□□ -1.81
CCDC7-213ENST00000639290 MAP7Q14244 749 aa3.77□□□□□ -1.81
CCDC7-213ENST00000639290 WDR43Q15061 677 aaKnown RBP eCLIP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms