RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RARBP10826 455 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 PTPN1P18031 435 aaKnown RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 MATKP42679 507 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 SLC8A3P57103 927 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 GBE1Q04446 702 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 TTC31Q49AM3 519 aaPredicted RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 STRADAQ7RTN6 431 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 DEFB106AQ8N104 65 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 DENND1AQ8TEH3 1009 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 SMG5Q9UPR3 1016 aaKnown RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 BEST1O76090 585 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 TSHRP16473 764 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 CTGFP29279 349 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 SLC10A2Q12908 348 aaPredicted RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 LACTB2Q53H82 288 aaPredicted RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 CSPG4P5Q96PW8 444 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 DHRS4Q9BTZ2 278 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 TSPYL2Q9H2G4 693 aaPredicted RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 ZFYVE28Q9HCC9 887 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 ST3GAL5Q9UNP4 418 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 USP15Q9Y4E8 981 aaPredicted RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 TEX264Q9Y6I9 313 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 NPR3P17342 541 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 FOXN2P32314 431 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 MLH1P40692 756 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 MSH2P43246 934 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 SULT1E1P49888 294 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 SLC18A1P54219 525 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 PAQR9Q6ZVX9 377 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 FAM131BQ86XD5 332 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 CDKL3Q8IVW4 592 aaPredicted RBP22.33■■□□□ 1.17
CLN6-224ENST00000638076 CCDC110Q8TBZ0 833 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 NMRK2Q9NPI5 230 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 ETNK2Q9NVF9 386 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 GTF2IRD1Q9UHL9 959 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 TRPV2Q9Y5S1 764 aa22.33■■□□□ 1.17
CLN6-224ENST00000638076 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 ZFXP17010 805 aaPredicted RBP22.32■■□□□ 1.16
CLN6-224ENST00000638076 CA4P22748 312 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 RPA3P35244 121 aaPredicted RBP22.32■■□□□ 1.16
CLN6-224ENST00000638076 NBPF20Q3BBV1 942 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 CXCL17Q6UXB2 119 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 PYROXD2Q8N2H3 581 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 CCDC33Q8N5R6 958 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 GSTCDQ8NEC7 633 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 MTG1Q9BT17 334 aaPredicted RBP22.32■■□□□ 1.16
CLN6-224ENST00000638076 KLC2Q9H0B6 622 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 FAM105AQ9NUU6 356 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 GABRDO14764 452 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 CTSHP09668 335 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 KRT4P19013 534 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 TAC1P20366 129 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 AFF1P51825 1210 aaKnown RBP22.32■■□□□ 1.16
CLN6-224ENST00000638076 SLC25A52Q3SY17 297 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 DCAF6Q58WW2 860 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 MDH1BQ5I0G3 518 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 KIAA0319Q5VV43 1072 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 DCAKDQ8WVC6 231 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 MED10Q9BTT4 135 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 ETNK1Q9HBU6 452 aa22.32■■□□□ 1.16
CLN6-224ENST00000638076 TYROBPO43914 113 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 GHRP10912 638 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 GOT1P17174 413 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SCTRP47872 440 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 NR2C2P49116 596 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
CLN6-224ENST00000638076 CRHR2Q13324 411 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 FBXW10Q5XX13 1052 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 GDF6Q6KF10 455 aaPredicted RBP22.31■■□□□ 1.16
CLN6-224ENST00000638076 CLEC20AQ6ZU45 233 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 AGGF1Q8N302 714 aaeCLIP22.31■■□□□ 1.16
CLN6-224ENST00000638076 WNT8BQ93098 351 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 GAD1Q99259 594 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 CYTH2Q99418 400 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 TCRBV9S1A1TA0A576 114 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 KPNA6O60684 536 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 PGK1P00558 417 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 APRTP07741 180 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 NDUFV1P49821 464 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 YWHAGP61981 247 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLN6-224ENST00000638076 YWHAZP63104 245 aaKnown RBP22.31■■□□□ 1.16
CLN6-224ENST00000638076 XRCC4Q13426 336 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SPARCL1Q14515 664 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SLC45A4Q5BKX6 768 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 TRPM8Q7Z2W7 1104 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SAPCD2Q86UD0 394 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 LPPQ93052 612 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SENP8Q96LD8 212 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 LRRC4Q9HBW1 653 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 SLC38A7Q9NVC3 462 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 DDX43Q9NXZ2 648 aaKnown RBP22.31■■□□□ 1.16
CLN6-224ENST00000638076 FZD10Q9ULW2 581 aa22.31■■□□□ 1.16
CLN6-224ENST00000638076 DAB1O75553 588 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 SUN1O94901 812 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 AMPD1P23109 780 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 GJA9P57773 515 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 PITX1P78337 314 aaPredicted RBP22.3■■□□□ 1.16
CLN6-224ENST00000638076 NCBP2-AS2Q69YL0 99 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 KCNT2Q6UVM3 1135 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms