RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 ENTPD7Q9NQZ7 604 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 TLR8Q9NR97 1041 aaKnown RBP12.27□□□□□ -0.45
CLN6-223ENST00000637823 CLIC5Q9NZA1 410 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 MTUS1Q9ULD2 1270 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 EFR3BQ9Y2G0 817 aa12.27□□□□□ -0.45
CLN6-223ENST00000637823 GOLGA6L10A0A0M3HER8 536 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 PI4K2BG5E9Z4 385 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 MDM4O15151 490 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 C1RP00736 705 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 CA3P07451 260 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 AIF1P55008 147 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 ERVK-21P61565 698 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 PITX1P78337 314 aaPredicted RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 C2orf54Q08AI8 447 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 TAF10Q12962 218 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 PLD1Q13393 1074 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 TAZQ16635 292 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 TFDP3Q5H9I0 405 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 PDE12Q6L8Q7 609 aaKnown RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 LILRA6Q6PI73 481 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 VSIG1Q86XK7 387 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 ZNF276Q8N554 614 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 RNF139Q8WU17 664 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 OVCA2Q8WZ82 227 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 HSPH1Q92598 858 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 NMUR1Q9HB89 426 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 TLR9Q9NR96 1032 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 OLA1Q9NTK5 396 aaKnown RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 RBM12Q9NTZ6 932 aaKnown RBP12.26□□□□□ -0.45
CLN6-223ENST00000637823 GMIPQ9P107 970 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 FBXW11Q9UKB1 542 aa12.26□□□□□ -0.45
CLN6-223ENST00000637823 hCG_1818297A0A087WSY0 165 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 UQCRHLA0A096LP55 91 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 ZNF487B1APH4 448 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 ARHGEF15O94989 841 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 TJP3O95049 919 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 IGLV3-25P01717 112 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 UQCRHP07919 91 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 ZDHHC11BP0C7U3 371 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 RALAP11233 206 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 DNAJB1P25685 340 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 KLRC2P26717 231 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 CDKN2BP42772 138 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 CXCR3P49682 368 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 PGFP49763 221 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 ARSEP51690 589 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 EPHB3P54753 998 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 NME3Q13232 169 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 VEPH1Q14D04 833 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 TAF12Q16514 161 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 GLE1Q53GS7 698 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 TEX35Q5T0J7 233 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 CCDC70Q6NSX1 233 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 MSANTD2Q6P1R3 559 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 CCDC149Q6ZUS6 474 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 RTL10Q7L3V2 364 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 NOA1Q8NC60 698 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 STKLD1Q8NE28 680 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 DQX1Q8TE96 717 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 MYRFLQ96LU7 910 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 SNRNP25Q9BV90 132 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 AP1M1Q9BXS5 423 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 SMOC2Q9H3U7 446 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 FAM204AQ9H8W3 233 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 WDR6Q9NNW5 1121 aaKnown RBP12.25□□□□□ -0.45
CLN6-223ENST00000637823 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 PIGVQ9NUD9 493 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLN6-223ENST00000637823 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 DDIT4Q9NX09 232 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.25□□□□□ -0.452e-9■■■■■ 36.3
CLN6-223ENST00000637823 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 MSRAQ9UJ68 235 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 FZD10Q9ULW2 581 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 YIPF1Q9Y548 306 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 ASB3Q9Y575 518 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 INSL5Q9Y5Q6 135 aa12.25□□□□□ -0.45
CLN6-223ENST00000637823 SYNJ2BP-COX16A0A087WUM0 186 aa12.24□□□□□ -0.45
CLN6-223ENST00000637823 TCRBV7S2A1N4TA0A589 114 aa12.24□□□□□ -0.45
CLN6-223ENST00000637823 H3BNC9 293 aa12.24□□□□□ -0.45
CLN6-223ENST00000637823 GRM6O15303 877 aa12.24□□□□□ -0.45
CLN6-223ENST00000637823 TGM5O43548 720 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms