RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PCSK1NQ9UHG2 260 aa16■□□□□ 0.15
CLN6-219ENST00000637329 PRUNE2Q8WUY3 3088 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 FYNP06241 537 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 CTSAP10619 480 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ATF2P15336 505 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 KDELR1P24390 212 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ARSEP51690 589 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 RABGGTBP53611 331 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 DEUP1Q05D60 604 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 DPYSL2Q16555 572 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 DDR2Q16832 855 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 TJAP1Q5JTD0 557 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ERMARDQ5T6L9 678 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 TTC9BQ8N6N2 239 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ANKRD7Q92527 254 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 RAPGEF5Q92565 580 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 NDRG1Q92597 394 aaKnown RBP15.99■□□□□ 0.15
CLN6-219ENST00000637329 HSPH1Q92598 858 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 KRT12Q99456 494 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ZNF670Q9BS34 389 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 SMOC2Q9H3U7 446 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 LRRC19Q9H756 370 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 PRDM16Q9HAZ2 1276 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 RXFP1Q9HBX9 757 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
CLN6-219ENST00000637329 STIM2Q9P246 746 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 RCOR3Q9P2K3 495 aaPredicted RBP15.99■□□□□ 0.15
CLN6-219ENST00000637329 EYSQ5T1H1 3165 aa15.99■□□□□ 0.15
CLN6-219ENST00000637329 PI4K2BG5E9Z4 385 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 M0QYT0 321 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 ADAM12O43184 909 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 IGLV3-25P01717 112 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 RHOXF2BP0C7M4 288 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 TFE3P19532 575 aaPredicted RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 GBP1P32455 592 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 CDR1P51861 262 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 ZNF135P52742 658 aaPredicted RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 UBE3AQ05086 875 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SCAPQ12770 1279 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 DUSP4Q13115 394 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 NAA30Q147X3 362 aaPredicted RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 ATP13A4Q4VNC1 1196 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 KCNT1Q5JUK3 1230 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SYPL2Q5VXT5 272 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 BTBD8Q5XKL5 378 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 MSANTD2Q6P1R3 559 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SCYL2Q6P3W7 929 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SND1Q7KZF4 910 aaKnown RBP eCLIP15.98■□□□□ 0.157e-7■□□□□ 8.6
CLN6-219ENST00000637329 KCTD6Q8NC69 237 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 OVCA2Q8WZ82 227 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SLCO2A1Q92959 643 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 RNF25Q96BH1 459 aaPredicted RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 RHOXF2Q9BQY4 288 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 ADAM33Q9BZ11 813 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 DDX47Q9H0S4 455 aaKnown RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 CRISPLD1Q9H336 500 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 FAM204AQ9H8W3 233 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 SPTBN5Q9NRC6 3674 aaKnown RBP15.98■□□□□ 0.15
CLN6-219ENST00000637329 CLIC5Q9NZA1 410 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 PCYOX1Q9UHG3 505 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 AP4E1Q9UPM8 1137 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 NAALADL1Q9UQQ1 740 aa15.98■□□□□ 0.15
CLN6-219ENST00000637329 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 C5orf67F2Z3F1 127 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 C2CD2LO14523 706 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 LILRB3O75022 631 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 FOSL2P15408 326 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 ATF6P18850 670 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 YWHAQP27348 245 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 TNFRSF8P28908 595 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 CTNNB1P35222 781 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 BMPR1AP36894 532 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 GPR15P49685 360 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 CDH6P55285 790 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 NNTQ13423 1086 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 TFDP2Q14188 446 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 DPYSL3Q14195 570 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 KRT81Q14533 505 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 DRICH1Q6PGQ1 229 aaPredicted RBP15.97■□□□□ 0.15
CLN6-219ENST00000637329 BBS12Q6ZW61 710 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 KLHL7Q8IXQ5 586 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 TTC13Q8NBP0 860 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 DQX1Q8TE96 717 aaKnown RBP15.97■□□□□ 0.15
CLN6-219ENST00000637329 GRK7Q8WTQ7 553 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 FBXO32Q969P5 355 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 ACSF2Q96CM8 615 aaPredicted RBP15.97■□□□□ 0.15
CLN6-219ENST00000637329 FAF2Q96CS3 445 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 SAMD11Q96NU1 681 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 CDK5RAP1Q96SZ6 601 aaKnown RBP15.97■□□□□ 0.15
CLN6-219ENST00000637329 LRRC1Q9BTT6 524 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 PCDH18Q9HCL0 1135 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms