RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IRF1P10914 325 aa18■□□□□ 0.47
CLN6-218ENST00000637223 MMP8P22894 467 aa18■□□□□ 0.47
CLN6-218ENST00000637223 GABRB2P47870 512 aa18■□□□□ 0.47
CLN6-218ENST00000637223 ZXDAP98168 799 aa18■□□□□ 0.47
CLN6-218ENST00000637223 OLFML1Q6UWY5 402 aa18■□□□□ 0.47
CLN6-218ENST00000637223 PHLDB2Q86SQ0 1253 aa18■□□□□ 0.47
CLN6-218ENST00000637223 XYLT1Q86Y38 959 aa18■□□□□ 0.47
CLN6-218ENST00000637223 MIB1Q86YT6 1006 aa18■□□□□ 0.47
CLN6-218ENST00000637223 MFSD6LQ8IWD5 586 aa18■□□□□ 0.47
CLN6-218ENST00000637223 YAF2Q8IY57 180 aa18■□□□□ 0.47
CLN6-218ENST00000637223 DRC7Q8IY82 874 aa18■□□□□ 0.47
CLN6-218ENST00000637223 BPIFB1Q8TDL5 484 aa18■□□□□ 0.47
CLN6-218ENST00000637223 ATOH1Q92858 354 aaPredicted RBP18■□□□□ 0.47
CLN6-218ENST00000637223 ZFRQ96KR1 1074 aaKnown RBP18■□□□□ 0.47
CLN6-218ENST00000637223 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
CLN6-218ENST00000637223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18■□□□□ 0.47
CLN6-218ENST00000637223 GKN1Q9NS71 199 aa18■□□□□ 0.47
CLN6-218ENST00000637223 OBP2AQ9NY56 170 aa18■□□□□ 0.47
CLN6-218ENST00000637223 TAS2R14Q9NYV8 317 aa18■□□□□ 0.47
CLN6-218ENST00000637223 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
CLN6-218ENST00000637223 DNMT3LQ9UJW3 386 aa18■□□□□ 0.47
CLN6-218ENST00000637223 SORCS3Q9UPU3 1222 aa18■□□□□ 0.47
CLN6-218ENST00000637223 BZW2Q9Y6E2 419 aaKnown RBP18■□□□□ 0.47
CLN6-218ENST00000637223 TRIOO75962 3097 aa18■□□□□ 0.47
CLN6-218ENST00000637223 USP34Q70CQ2 3546 aa18■□□□□ 0.47
CLN6-218ENST00000637223 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 GOLGA8SH3BPF8 625 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 SCAMP3O14828 347 aaKnown RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 FYNP06241 537 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 NCAM1P13591 858 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 PSMC3P17980 439 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 HNRNPH3P31942 346 aaKnown RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 SLC6A3Q01959 620 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 USP4Q13107 963 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 ZNF77Q15935 545 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 TSR1Q2NL82 804 aaKnown RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 ACAD10Q6JQN1 1059 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 KLHDC10Q6PID8 442 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 WDR59Q6PJI9 974 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 TOGARAM2Q6ZUX3 1019 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 DNAAF5Q86Y56 855 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 ZNF276Q8N554 614 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 DEPDC1BQ8WUY9 529 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 TRMT61BQ9BVS5 477 aaKnown RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 KLF16Q9BXK1 252 aaPredicted RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 ZNHIT6Q9NWK9 470 aaKnown RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 ADAM22Q9P0K1 906 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 CFAP97Q9P2B7 532 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 NAALADL1Q9UQQ1 740 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 ZFHX2Q9C0A1 2572 aaPredicted RBP17.99■□□□□ 0.47
CLN6-218ENST00000637223 OBSL1O75147 1896 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 MYO16Q9Y6X6 1858 aa17.99■□□□□ 0.47
CLN6-218ENST00000637223 CAPN9O14815 690 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 HMBSP08397 361 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 GDI1P31150 447 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 YWHAZP63104 245 aaKnown RBP17.98■□□□□ 0.47
CLN6-218ENST00000637223 GPC5P78333 572 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 PTP4A2Q12974 167 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 MTF1Q14872 753 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 EFHC1Q5JVL4 640 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
CLN6-218ENST00000637223 PHF13Q86YI8 300 aaPredicted RBP17.98■□□□□ 0.47
CLN6-218ENST00000637223 ZDHHC17Q8IUH5 632 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 WBP2Q969T9 261 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 ZFYVE19Q96K21 471 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 OLA1Q9NTK5 396 aaKnown RBP17.98■□□□□ 0.47
CLN6-218ENST00000637223 MARCH2Q9P0N8 246 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 ADAMTS1Q9UHI8 967 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 SFMBT1Q9UHJ3 866 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 STRIP2Q9ULQ0 834 aa17.98■□□□□ 0.47
CLN6-218ENST00000637223 SLC12A8A0AV02 714 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 HSF2BPO75031 334 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 GLI1P08151 1106 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 CDC25BP30305 580 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 EIF4A3P38919 411 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 VCPP55072 806 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 RNASE9P60153 205 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 FCHO2Q0JRZ9 810 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 SYPL2Q5VXT5 272 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 SLC26A9Q7LBE3 791 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 VPS36Q86VN1 386 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 DDX42Q86XP3 938 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN6-218ENST00000637223 DEFB106AQ8N104 65 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 TC2NQ8N9U0 490 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 SPC24Q8NBT2 197 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 DQX1Q8TE96 717 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 TRIM62Q9BVG3 475 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 BRD9Q9H8M2 597 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 ASNSD1Q9NWL6 643 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 THG1LQ9NWX6 298 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 DUSP12Q9UNI6 340 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 SH3BP1Q9Y3L3 701 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 ZNF638Q14966 1978 aaKnown RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 CFAP54Q96N23 3096 aa17.97■□□□□ 0.47
CLN6-218ENST00000637223 PTPRZ1P23471 2315 aaPredicted RBP17.97■□□□□ 0.47
CLN6-218ENST00000637223 ZNF263O14978 683 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms