RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 LRRC3Q9BY71 257 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 GOLPH3Q9H4A6 298 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 DZANK1Q9NVP4 752 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC00643-207ENST00000637212 OSER1Q9NX31 292 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 HCFC2Q9Y5Z7 792 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 SAR1BQ9Y6B6 198 aa13.97□□□□□ -0.17
LINC00643-207ENST00000637212 M0QYT0 321 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 ENC1O14682 589 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 DDX3YO15523 660 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 NCK2O43639 380 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 CSPG5O95196 566 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 TRUB2O95900 331 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 IGLV3-25P01717 112 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 MIPP30301 263 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 SSR1P43307 286 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 PGFP49763 221 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 SULT1E1P49888 294 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 EPHA5P54756 1037 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 AIF1P55008 147 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 HDAC4P56524 1084 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 RWDD2BP57060 319 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 ATP11AP98196 1134 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 C15orf59Q2T9L4 293 aaPredicted RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 HECTD3Q5T447 861 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 SND1Q7KZF4 910 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 RSRC2Q7L4I2 434 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 EFHBQ8N7U6 833 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 SMOC2Q9H3U7 446 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 DDX56Q9NY93 547 aaKnown RBP13.96□□□□□ -0.17
LINC00643-207ENST00000637212 RNF14Q9UBS8 474 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 USP18Q9UMW8 372 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 HYOU1Q9Y4L1 999 aa13.96□□□□□ -0.17
LINC00643-207ENST00000637212 CCDC195A0A1B0GUA6 201 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 FANCGO15287 622 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 SLC2A3P11169 496 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 CDC25CP30307 473 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 ATP5C1P36542 298 aaKnown RBP13.95□□□□□ -0.18
LINC00643-207ENST00000637212 CXCR3P49682 368 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 TAS2R40P59535 323 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 DEUP1Q05D60 604 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 MTA1Q13330 715 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 NNTQ13423 1086 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 CLUL1Q15846 466 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 TMEM150AQ86TG1 271 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 KATNAL2Q8IYT4 538 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 TEKT4Q8WW24 435 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 SERPINB11Q96P15 392 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 ASAH2Q9NR71 780 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 SZT2Q5T011 3432 aa13.95□□□□□ -0.18
LINC00643-207ENST00000637212 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF197O14709 1029 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 CCL16O15467 120 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 TLR5O60602 858 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ZRANB2O95218 330 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 TFE3P19532 575 aaPredicted RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 CETN2P41208 172 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 AMPD2Q01433 879 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 SLC25A11Q02978 314 aaKnown RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 NME3Q13232 169 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ARL13BQ3SXY8 428 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 BRMS1LQ5PSV4 323 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 C10orf120Q5SQS8 335 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ERMARDQ5T6L9 678 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 OTUD1Q5VV17 481 aaPredicted RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 SCYL2Q6P3W7 929 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 TAC4Q86UU9 113 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 CPNE8Q86YQ8 564 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 TMC8Q8IU68 726 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 KRT35Q92764 455 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 NTAN1Q96AB6 310 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 GCNAQ96QF7 691 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 CARD9Q9H257 536 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 WDCPQ9H6R7 721 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 FAM204AQ9H8W3 233 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 SFXN1Q9H9B4 322 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF334Q9HCZ1 680 aaPredicted RBP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00643-207ENST00000637212 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 ZMYM5Q9UJ78 669 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 DNMT3LQ9UJW3 386 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 TLR6Q9Y2C9 796 aa13.94□□□□□ -0.18
LINC00643-207ENST00000637212 HBS1LQ9Y450 684 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms