RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DAB1O75553 588 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 PRAMEF12O95522 483 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 MYBL1P10243 752 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 NCAM1P13591 858 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 RRM1P23921 792 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 ATP5C1P36542 298 aaKnown RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 ZP2Q05996 745 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 DNAJC24Q6P3W2 148 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 ARCQ7LC44 396 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 ZNF653Q96CK0 615 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 NACA2Q9H009 215 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 SMG9Q9H0W8 520 aaKnown RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 METTL5Q9NRN9 209 aaKnown RBP16.73■□□□□ 0.27
CLN6-216ENST00000636876 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 TMEM59LQ9UK28 342 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 ARHGAP26Q9UNA1 814 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 NAALADL1Q9UQQ1 740 aa16.73■□□□□ 0.27
CLN6-216ENST00000636876 ANHXE9PGG2 379 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 CAPN9O14815 690 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 ZNF263O14978 683 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 ATMINO43313 823 aaPredicted RBP16.72■□□□□ 0.27
CLN6-216ENST00000636876 LCA5LO95447 670 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 GJB6O95452 261 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 COL9A1P20849 921 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 ABCB4P21439 1286 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 FCARP24071 287 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 GALCP54803 685 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 RNASE9P60153 205 aaKnown RBP16.72■□□□□ 0.27
CLN6-216ENST00000636876 EFEMP1Q12805 493 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 HTR4Q13639 388 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 SYPL2Q5VXT5 272 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 PLEKHA7Q6IQ23 1121 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 MTSS1LQ765P7 747 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 DEFB106AQ8N104 65 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 USP13Q92995 863 aaPredicted RBP16.72■□□□□ 0.27
CLN6-216ENST00000636876 ZFRQ96KR1 1074 aaKnown RBP16.72■□□□□ 0.27
CLN6-216ENST00000636876 SELENOOQ9BVL4 669 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 KIF9Q9HAQ2 790 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 MARCH2Q9P0N8 246 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 CNOT8Q9UFF9 292 aaKnown RBP16.72■□□□□ 0.27
CLN6-216ENST00000636876 RASAL2Q9UJF2 1139 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 CPQQ9Y646 472 aa16.72■□□□□ 0.27
CLN6-216ENST00000636876 HELZP42694 1942 aaKnown RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 ANKRD62A6NC57 917 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 SIGLEC16A6NMB1 481 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 NDUFA10O95299 355 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 H2AFZP0C0S5 128 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 KRT3P12035 628 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 NOS2P35228 1153 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 VIPR2P41587 438 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 MATKP42679 507 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 MTF1Q14872 753 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 DCAF6Q58WW2 860 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 PPP1R15BQ5SWA1 713 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 TANGO2Q6ICL3 276 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 PARM1Q6UWI2 310 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 RAD9BQ6WBX8 426 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 H2AFVQ71UI9 128 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 MIB1Q86YT6 1006 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 JOSD2Q8TAC2 188 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 DQX1Q8TE96 717 aaKnown RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 E2F7Q96AV8 911 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 RSPRY1Q96DX4 576 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 KLF16Q9BXK1 252 aaPredicted RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 THAP2Q9H0W7 228 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 ZFP14Q9HCL3 533 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 PARVAQ9NVD7 372 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 OBP2AQ9NY56 170 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLN6-216ENST00000636876 LIMD1Q9UGP4 676 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
CLN6-216ENST00000636876 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
CLN6-216ENST00000636876 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 DPYSL4O14531 572 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 ECI2O75521 394 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 CYP1A2P05177 515 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 TCF3P15923 654 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 FLT3P36888 993 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 GPC5P78333 572 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 ZXDBP98169 803 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 USP4Q13107 963 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 MAMLD1Q13495 774 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 TRNP1Q6NT89 227 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 DDX42Q86XP3 938 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLN6-216ENST00000636876 LRRC8AQ8IWT6 810 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
CLN6-216ENST00000636876 EMC1Q8N766 993 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 CCDC112Q8NEF3 446 aa16.7■□□□□ 0.26
CLN6-216ENST00000636876 ST13P5Q8NFI4 369 aaPredicted RBP16.7■□□□□ 0.26
CLN6-216ENST00000636876 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms