RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 UBXN11Q5T124 520 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 ZNF449Q6P9G9 518 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 ALKAL1Q6UXT8 129 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 OTOAQ7RTW8 1153 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 DEFB106AQ8N104 65 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 RNF169Q8NCN4 708 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 ZNF75CPQ92670 426 aaPredicted RBP19.61■□□□□ 0.73
CLN5-216ENST00000636780 TTC17Q96AE7 1141 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 FAM111AQ96PZ2 611 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 SLC13A1Q9BZW2 595 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 SEPT10Q9P0V9 454 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 AP4E1Q9UPM8 1137 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 L3MBTL1Q9Y468 752 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 TEX264Q9Y6I9 313 aa19.61■□□□□ 0.73
CLN5-216ENST00000636780 CREB3O43889 395 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 GSCP56915 257 aaPredicted RBP19.6■□□□□ 0.73
CLN5-216ENST00000636780 WSCD1Q658N2 575 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 TWF2Q6IBS0 349 aaKnown RBP19.6■□□□□ 0.73
CLN5-216ENST00000636780 ADGRD1Q6QNK2 874 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 CES3Q6UWW8 571 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 DENND5BQ6ZUT9 1274 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 PCGF5Q86SE9 256 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 PIGZQ86VD9 579 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 ZNF410Q86VK4 478 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 RFWD2Q8NHY2 731 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 LRRC8CQ8TDW0 803 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 ERP27Q96DN0 273 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 KCNK16Q96T55 309 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 WNT8BQ93098 351 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 PRR11Q96HE9 360 aaPredicted RBP19.6■□□□□ 0.73
CLN5-216ENST00000636780 FOXP3Q9BZS1 431 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 SNX25Q9H3E2 840 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 TMEM30AQ9NV96 361 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 GNEQ9Y223 722 aaKnown RBP19.6■□□□□ 0.73
CLN5-216ENST00000636780 CHKBQ9Y259 395 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 IPPQ9Y573 584 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 SNX10Q9Y5X0 201 aa19.6■□□□□ 0.73
CLN5-216ENST00000636780 E7ESA3 106 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 CYB561D2O14569 222 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 CACNA2D1P54289 1103 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 XRCC4Q13426 336 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 SPRYD7Q5W111 196 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 SMG8Q8ND04 991 aaKnown RBP19.59■□□□□ 0.73
CLN5-216ENST00000636780 SGSM3Q96HU1 749 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 KLHL14Q9P2G3 628 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 MORF4L1Q9UBU8 362 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 A6NJR5 290 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 CBX6O95503 412 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 TFDP2Q14188 446 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 BOLA3Q53S33 107 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 IQSEC1Q6DN90 963 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 TDRPQ86YL5 185 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 DEPDC1BQ8WUY9 529 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 ANLNQ9NQW6 1124 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 HAO1Q9UJM8 370 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 COL1A2P08123 1366 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 PIRO00625 290 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 F2P00734 622 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 LILRA4P59901 499 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 SEPT7Q16181 437 aaKnown RBP19.59■□□□□ 0.73
CLN5-216ENST00000636780 DCAF4L1Q3SXM0 396 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 ICE2Q659A1 982 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 MAP7D3Q8IWC1 876 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 HASPINQ8TF76 798 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 KLHL29Q96CT2 875 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 CSPG4P5Q96PW8 444 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 RRAGCQ9HB90 399 aa19.59■□□□□ 0.73
CLN5-216ENST00000636780 ZC3H7BQ9UGR2 993 aaKnown RBP19.59■□□□□ 0.73
CLN5-216ENST00000636780 CCDC195A0A1B0GUA6 201 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 FAM72CH0Y354 149 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 MT-ND3P03897 115 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 VAV1P15498 845 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 STIP1P31948 543 aaKnown RBP19.58■□□□□ 0.73
CLN5-216ENST00000636780 PHBP35232 272 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 GALNTL6Q49A17 601 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 FAM72AQ5TYM5 149 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 FAM72DQ6L9T8 149 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 FAM72BQ86X60 149 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 ADGRF2Q8IZF7 708 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 ZNF276Q8N554 614 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 APPL2Q8NEU8 664 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 MIOSQ9NXC5 875 aa19.58■□□□□ 0.73
CLN5-216ENST00000636780 PTGESO14684 152 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 PRPF4O43172 522 aaKnown RBP eCLIP19.58■□□□□ 0.72
CLN5-216ENST00000636780 ZNF865P0CJ78 1059 aaPredicted RBP19.58■□□□□ 0.72
CLN5-216ENST00000636780 GHRP10912 638 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 ANKRD52Q8NB46 1076 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 DTLQ9NZJ0 730 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 CNTN3Q9P232 1028 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 SLC24A2Q9UI40 661 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.58■□□□□ 0.72
CLN5-216ENST00000636780 ACTL7BQ9Y614 415 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 NRCAMQ92823 1304 aa19.58■□□□□ 0.72
CLN5-216ENST00000636780 TRIM49D1C9J1S8 452 aa19.57■□□□□ 0.72
CLN5-216ENST00000636780 NRP1O14786 923 aa19.57■□□□□ 0.72
CLN5-216ENST00000636780 USP12O75317 370 aa19.57■□□□□ 0.72
CLN5-216ENST00000636780 DNAJC8O75937 253 aaPredicted RBP19.57■□□□□ 0.72
CLN5-216ENST00000636780 CSH1P0DML2 217 aa19.57■□□□□ 0.72
CLN5-216ENST00000636780 CSH2P0DML3 217 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms