RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF669Q96BR6 464 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 QRFPRQ96P65 431 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PPP1R10Q96QC0 940 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GAS2L1Q99501 681 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 FRMD8P1Q9BZ68 369 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TMEM8AQ9HCN3 771 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 COMMD9Q9P000 198 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 STAP2Q9UGK3 403 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 KIAA0556O60303 1618 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM43BA6NCK2 446 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PHF20L1A8MW92 1017 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MSH4O15457 936 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 DGKIO75912 1065 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PDE9AO76083 593 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ABCB1P08183 1280 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 R3HDM1Q15032 1099 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM16LQ309B1 348 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 KIAA0408Q6ZU52 694 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PLEKHH3Q7Z736 793 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CBWD2Q8IUF1 395 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GUF1Q8N442 669 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CCDC54Q8NEL0 328 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 BSNDQ8WZ55 320 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 NARS2Q96I59 477 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ATP6V1G3Q96LB4 118 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MARCOQ9UEW3 520 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 BIVM-ERCC5R4GMW8 1640 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 E2F8A0AVK6 867 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 RAD51BO15315 384 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PQBP1O60828 265 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 RTN3O95197 1032 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SNX4O95219 450 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ITGB3P05106 788 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TAB1Q15750 504 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF484Q5JVG2 852 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 THOC7Q6I9Y2 204 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SLC35G2Q8TBE7 412 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SUSD6Q92537 303 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SPATA9Q9BWV2 254 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 IDI2Q9BXS1 227 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TMEM117Q9H0C3 514 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MIR1-1HGQ9H1L0 117 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 RSPH9Q9H1X1 276 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 IL1RAPL1Q9NZN1 696 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 BCLAF3A2AJT9 711 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM64A6NGJ6 449 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MAGEB3O15480 346 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 FBXO21O94952 628 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 AGTP01019 485 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 FCGR1AP12314 374 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF23P17027 643 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 NFKB1P19838 968 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MAGEA9P43362 315 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MRPS35P82673 323 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CBWD3Q5JTY5 395 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CBWD5Q5RIA9 395 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SLFN11Q7Z7L1 901 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 NLRP14Q86W24 1093 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MIB1Q86YT6 1006 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MCEMP1Q8IX19 187 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ADGRF2Q8IZF7 708 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 AGGF1Q8N302 714 aaeCLIP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CEP44Q9C0F1 390 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TBC1D13Q9NVG8 400 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CBX4O00257 560 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 IGFALSP35858 605 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 STAT5AP42229 794 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GPR15P49685 360 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM25Q14258 630 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 NFE2Q16621 373 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 KLHL12Q53G59 568 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GPAT2Q6NUI2 795 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GPR141Q7Z602 305 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PPIL6Q8IXY8 311 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 EID3Q8N140 333 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PJA1Q8NG27 643 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 RDM1Q8NG50 284 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 PROX1Q92786 737 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ACTR8Q9H981 624 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 MYOZ2Q9NPC6 264 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM49BA6NDI0 452 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 GTPBP1O00178 669 aaKnown RBP5.7□□□□□ -1.5
SCN1A-209ENST00000635750 IGSF6O95976 241 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 CYP2D6P10635 497 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 MCAMP43121 646 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 PLIN5Q00G26 463 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 EFEMP1Q12805 493 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 BTG3Q14201 252 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-209ENST00000635750 PTPN21Q16825 1174 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 PAGE2BQ5JRK9 111 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 NFRKBQ6P4R8 1299 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 CCNJLQ8IV13 435 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 RP9Q8TA86 221 aaKnown RBP5.7□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF671Q8TAW3 534 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 TPD52L3Q96J77 140 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 STRBPQ96SI9 672 aaKnown RBP5.7□□□□□ -1.5
SCN1A-209ENST00000635750 ANTXR1Q9H6X2 564 aa5.7□□□□□ -1.5
SCN1A-209ENST00000635750 PIH1D3Q9NQM4 214 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms