RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SLC9A3R1O14745 358 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SCAMP3O14828 347 aaKnown RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 STC2O76061 302 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 KLKB1P03952 638 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 ERBB2P04626 1255 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 FERP16591 822 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 GABRB2P47870 512 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SOX9P48436 509 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 IFNAR2P48551 515 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 CLCN5P51795 746 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 KPNA1P52294 538 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SNX16P57768 344 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 YWHAZP63104 245 aaKnown RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 NOMO3P69849 1222 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 COG7P83436 770 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 TAF5Q15542 800 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 MSANTD2Q6P1R3 559 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 Q6ZNB5 142 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 TPRG1Q6ZUI0 275 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 TTC8Q8TAM2 541 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 RNF139Q8WU17 664 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 CPA5Q8WXQ8 436 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 ATP2A3Q93084 1043 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 CHFRQ96EP1 664 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 PIWIL1Q96J94 861 aaKnown RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 PCDHB18PQ96TA0 734 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SYT11Q9BT88 431 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 MFSD1Q9H3U5 465 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 C8orf33Q9H7E9 229 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-210ENST00000635675 ECT2Q9H8V3 914 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 AIPL1Q9NZN9 384 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 TBC1D14Q9P2M4 693 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SH3BP1Q9Y3L3 701 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 PIAS3Q9Y6X2 628 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 MAN2B1O00754 1011 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 CBFA2T2O43439 604 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 PI15O43692 258 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 TPM3P06753 285 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 GLI1P08151 1106 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 IRF1P10914 325 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 UNGP13051 313 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 NCAM1P13591 858 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 CD72P21854 359 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 CTHP32929 405 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 GOLGA8FQ08AF8 430 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 GOLGA8DPQ0D2H9 430 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 EFHC1Q5JVL4 640 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 SFMBT2Q5VUG0 894 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 SYPL2Q5VXT5 272 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 NAA35Q5VZE5 725 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ASTLQ6HA08 431 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF852Q6ZMS4 543 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 TRIM72Q6ZMU5 477 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 RALGPS2Q86X27 583 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ERICH1Q86X53 443 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ZDHHC17Q8IUH5 632 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 BBS7Q8IWZ6 715 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF687Q8N1G0 1237 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 CPA6Q8N4T0 437 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 FLCNQ8NFG4 579 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 C18orf8Q96DM3 657 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 IQCDQ96DY2 449 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 MSANTD3Q96H12 275 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 NELL2Q99435 816 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 AGPAT1Q99943 283 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 TRIM62Q9BVG3 475 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ASNSD1Q9NWL6 643 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 SFMBT1Q9UHJ3 866 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 CAPN11Q9UMQ6 739 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 NAALADL1Q9UQQ1 740 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 HBS1LQ9Y450 684 aaKnown RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-210ENST00000635675 ITIH6Q6UXX5 1313 aa10.17□□□□□ -0.78
LINC00339-210ENST00000635675 SLC12A8A0AV02 714 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 STK25O00506 426 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 AP5Z1O43299 807 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 NFATC1O95644 943 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CYP17A1P05093 508 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 AOC1P19801 751 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MMP8P22894 467 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 AVPR2P30518 371 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 GJA4P35212 333 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 PRKCIP41743 596 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 NR1H3Q13133 447 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 FZD5Q13467 585 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 DHCR24Q15392 516 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 TRIP4Q15650 581 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms