RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 TXLNGQ9NUQ3 528 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 Q9Y3F1 56 aa12.87□□□□□ -0.35
PTPN11-205ENST00000635625 A8MXQ7 604 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 KCNN4O15554 427 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 EDF1O60869 148 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 GCATO75600 419 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 UBOX5O94941 541 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 IL1BP01584 269 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 INHBAP08476 426 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 KRT4P19013 534 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 IL4RP24394 825 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SSTR1P30872 391 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 FOXN2P32314 431 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 RGS7P49802 495 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 TAF6P49848 677 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 CPT1AP50416 773 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 PDE4CQ08493 712 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 CDO1Q16878 200 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SLC45A4Q5BKX6 768 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 CHSY1Q86X52 802 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 TOP6BLQ8N6T0 577 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 QKIQ96PU8 341 aaKnown RBP eCLIP12.86□□□□□ -0.356e-6■■■■□ 20.5
PTPN11-205ENST00000635625 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SETD4Q9NVD3 440 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 PHTF1Q9UMS5 762 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SPAG7O75391 227 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 MT-ND3P03897 115 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 GNAT1P11488 350 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 CCNB1P14635 433 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 WARSP23381 471 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 RPA3P35244 121 aaPredicted RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ELK3P41970 407 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 HDAC4P56524 1084 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 CDK16Q00536 496 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SOWAHAQ2M3V2 549 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 BANPQ8N9N5 519 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 PCDH19Q8TAB3 1148 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 MTBPQ96DY7 904 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 APOPT1Q96IL0 206 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 WDR83Q9BRX9 315 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 ETNK2Q9NVF9 386 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
PTPN11-205ENST00000635625 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
PTPN11-205ENST00000635625 TCRBV7S3A2A0A539 114 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 TCRBV9S1A1TA0A576 114 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 HAS3O00219 553 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 ATP2C2O75185 946 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 DAB1O75553 588 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 TROVE2P10155 538 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CYP2F1P24903 491 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 GNL1P36915 607 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CRYBB1P53674 252 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 AIF1P55008 147 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 NCALDP61601 193 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 ATP11AP98196 1134 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 SLC18A2Q05940 514 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 HP1BP3Q5SSJ5 553 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CGB2Q6NT52 195 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 C1orf228Q6PIY5 440 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 LVRNQ6Q4G3 990 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CAPN12Q6ZSI9 719 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CYS1Q717R9 158 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 PIWIL1Q96J94 861 aaKnown RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 RAB3IPQ96QF0 476 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 EIF2AQ9BY44 585 aaKnown RBP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 ECT2Q9H8V3 914 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN11-205ENST00000635625 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
PTPN11-205ENST00000635625 SMIM28A0A1B0GU29 152 aa12.84□□□□□ -0.35
PTPN11-205ENST00000635625 KBTBD13C9JR72 458 aa12.84□□□□□ -0.35
PTPN11-205ENST00000635625 HUS1O60921 280 aa12.84□□□□□ -0.35
PTPN11-205ENST00000635625 KRT37O76014 449 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms