RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 RGS10O43665 173 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 MGEA5O60502 916 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 UBXN7O94888 489 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 UNC5CO95185 931 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 VNN1O95497 513 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 CHEK2O96017 543 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 PLGP00747 810 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 GRPP07492 148 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FTH1P19P0C7X4 201 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RARBP10826 455 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RHCEP18577 417 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC7A1P30825 629 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 PXNP49023 591 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ITGA8P53708 1063 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 LILRA4P59901 499 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RAB1AP62820 205 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 E2F1Q01094 437 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SRSF1Q07955 248 aaKnown RBP eCLIP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 NFATC4Q14934 902 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 IQCB1Q15051 598 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SEC23BQ15437 767 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 INPP5JQ15735 1006 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 KIAA0753Q2KHM9 967 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 TBC1D25Q3MII6 688 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RNASE12Q5GAN4 147 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ATAT1Q5SQI0 421 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 TMTC4Q5T4D3 741 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM102BQ5T8I3 360 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 DEPDC1Q5TB30 811 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM160B1Q5W0V3 765 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 LMBRD2Q68DH5 695 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RGS7BPQ6MZT1 257 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF783Q6ZMS7 281 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF793Q6ZN11 406 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 PPP1R3BQ86XI6 285 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 PDSS2Q86YH6 399 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 MMP21Q8N119 569 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 PRR18Q8N4B5 295 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC15A4Q8N697 577 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 CELF5Q8N6W0 485 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 B4GALNT2Q8NHY0 566 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC35G2Q8TBE7 412 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 RAPGEF4Q8WZA2 1011 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC25A28Q96A46 364 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM167AQ96KS9 214 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 CCDC17Q96LX7 622 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC46A1Q96NT5 459 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 NT5C1BQ96P26 610 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FYTTD1Q96QD9 318 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 DMRTA2Q96SC8 542 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 NUP88Q99567 741 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 P2RX7Q99572 595 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 MEIS3Q99687 375 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 DPCDQ9BVM2 203 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 APOL5Q9BWW9 433 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 B3GNT5Q9BYG0 378 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 CDH19Q9H159 772 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC12A5Q9H2X9 1139 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM204AQ9H8W3 233 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 METTL14Q9HCE5 456 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SIDT1Q9NXL6 827 aaKnown RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ASIC5Q9NY37 505 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 XPR1Q9UBH6 696 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ITGB1BP2Q9UKP3 347 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 HDAC9Q9UKV0 1011 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ZDHHC8Q9ULC8 765 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 OGDHLQ9ULD0 1010 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 TPCN1Q9ULQ1 816 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 SSX2IPQ9Y2D8 614 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 WDR7Q9Y4E6 1490 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 KIF1BO60333 1816 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 FRMPD2Q68DX3 1309 aaPredicted RBP1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 EFCAB5A4FU69 1503 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 KIAA0586Q9BVV6 1533 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 ITSN1Q15811 1721 aa1.35□□□□□ -2.19
SMARCB1-209ENST00000635578 NOTCH3Q9UM47 2321 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RGPD2P0DJD1 1756 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 FHOD3Q2V2M9 1422 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 NHSL1Q5SYE7 1610 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 IGLV5-39A0A0G2JS06 123 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CAPN8A6NHC0 703 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 NT5C1B-RDH14C9J2C7 533 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM227AF5H4B4 570 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 hCG_1984214I3L0E3 225 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 BTN3A1O00481 513 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ERC2O15083 957 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PHGDHO43175 533 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 TSPAN6O43657 245 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RFPL1O75677 317 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF432O94892 652 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RASAL1O95294 804 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 SYF2O95926 243 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 HMGB1P09429 215 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 DLDP09622 509 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 COPB1P53618 953 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CACNB3P54284 484 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 SUMO3P55854 103 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 UCP3P55916 312 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RRP1P56182 461 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms