RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	CABYR	O75952	493 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SERPINB6	P35237	376 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	PCSK7	Q16549	785 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	FBXO32	Q969P5	355 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	COLEC11	Q9BWP8	271 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	NINJ2	Q9NZG7	142 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SRRD	Q9UH36	339 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	EIF3H	O15372	352 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	KRT37	O76014	449 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	AARS	P49588	968 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CLDN10	P78369	228 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	FAM133B	Q5BKY9	247 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	NOMO2	Q5JPE7	1267 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	STKLD1	Q8NE28	680 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	HSFY1	Q96LI6	401 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SYT11	Q9BT88	431 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	DUSP16	Q9BY84	665 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	AGO3	Q9H9G7	860 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CFAP69	A5D8W1	941 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	LPXN	O60711	386 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	PBX3	P40426	434 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SPARCL1	Q14515	664 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	ANKRD20A8P	Q5CZ79	823 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	ZDHHC17	Q8IUH5	632 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	WDTC1	Q8N5D0	677 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	GIPC2	Q8TF65	315 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	BFAR	Q9NZS9	450 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CYTH4	Q9UIA0	394 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	DSE	Q9UL01	958 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SLC27A5	Q9Y2P5	690 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CAPN7	Q9Y6W3	813 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CCDC195	A0A1B0GUA6	201 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	RBM47	A0AV96	593 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	RPLP2	P05387	115 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	TNFRSF8	P28908	595 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CDKN2B	P42772	138 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	DDR2	Q16832	855 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	AGBL2	Q5U5Z8	902 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	PYROXD2	Q8N2H3	581 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	TMEM86A	Q8N2M4	240 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	ATPAF2	Q8N5M1	289 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	RILP	Q96NA2	401 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	RNF157	Q96PX1	679 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	CYTH2	Q99418	400 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	SP110	Q9HB58	689 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	UBN1	Q9NPG3	1134 aa		13.78	□□□□□ -0.2
NRXN1-233	ENST00000630543	COPE	O14579	308 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	PRRG1	O14668	218 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	SCAMP3	O14828	347 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	SPTLC1	O15269	473 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	FBXO21	O94952	628 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	RPL22	P35268	128 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	ETFB	P38117	255 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	TOP6BL	Q8N6T0	577 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	PCED1B	Q96HM7	432 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	CCT8L2	Q96SF2	557 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	TKTL2	Q9H0I9	626 aa		13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	RRP15	Q9Y3B9	282 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-233	ENST00000630543	TCP11X1	B4DZS4	312 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	TUSC3	Q13454	348 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	MORF4L2	Q15014	288 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	EP400NL	Q6ZTU2	488 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	BBS12	Q6ZW61	710 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	TFAP2D	Q7Z6R9	452 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	RYBP	Q8N488	228 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	VPS11	Q9H270	941 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	CHST12	Q9NRB3	414 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	TIGD5	Q53EQ6	642 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	WNT8B	Q93098	351 aa		13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	TGS1	Q96RS0	853 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-233	ENST00000630543	JCHAIN	P01591	159 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	TROVE2	P10155	538 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	NOS2	P35228	1153 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	MRPS5	P82675	430 aa	Known RBP	13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	ACAP1	Q15027	740 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	CHSY1	Q86X52	802 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	IPMK	Q8NFU5	416 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	LGMN	Q99538	433 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	PITPNM3	Q9BZ71	974 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	CDH9	Q9ULB4	789 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	NR2E3	Q9Y5X4	410 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	DOCK1	Q14185	1865 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	FOXO6	A8MYZ6	492 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	USP12	O75317	370 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	ELK3	P41970	407 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	PTGIR	P43119	386 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	COG7	P83436	770 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	ZNF280D	Q6N043	979 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	POLN	Q7Z5Q5	900 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	IQCK	Q8N0W5	287 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	ALLC	Q8N6M5	410 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	CHMP6	Q96FZ7	201 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	B3GALT6	Q96L58	329 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	PCDH18	Q9HCL0	1135 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	CNTN3	Q9P232	1028 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	FOCAD	Q5VW36	1801 aa		13.76	□□□□□ -0.21
NRXN1-233	ENST00000630543	AGPS	O00116	658 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms