RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CACUL1Q86Y37 369 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SPIRE2Q8WWL2 714 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ACOX2Q99424 681 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SYBUQ9NX95 663 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 NCKAP1Q9Y2A7 1128 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FBXO21O94952 628 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 NUDT14O95848 222 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 JCHAINP01591 159 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ATP6V1B1P15313 513 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 VANGL2Q9ULK5 521 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.47
SHPRH-211ENST00000629427 KATNA1O75449 491 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 EIF2S1P05198 315 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 IGFBP4P22692 258 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CCR1P32246 355 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CHRNB3Q05901 458 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 NFYCQ13952 458 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 PTGISQ16647 500 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CBWD1Q9BRT8 395 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 NLNQ9BYT8 704 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 KLHL20Q9Y2M5 609 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 MED14O60244 1454 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 NOS3P29474 1203 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 POU6F1Q14863 301 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SERPINB3P29508 390 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 FNTAP49354 379 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 OTUD4Q01804 1114 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ADIGQ0VDE8 80 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 GRIK4Q16099 956 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 OVOS1Q6IE37 1185 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 DPP10Q8N608 796 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SPATC1LQ9H0A9 340 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CXCL8P10145 99 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ICE2Q659A1 982 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 KCNB2Q92953 911 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ELOVL6Q9H5J4 265 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 STMN3Q9NZ72 180 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CSHL1Q14406 222 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ERMARDQ5T6L9 678 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 RXFP2Q8WXD0 754 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 MORC2Q9Y6X9 1032 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
SHPRH-211ENST00000629427 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
SHPRH-211ENST00000629427 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 BMP10O95393 424 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SLC26A2P50443 739 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 WDR49Q8IV35 697 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CGRRF1Q99675 332 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 GPAMQ9HCL2 828 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SMPD4Q9NXE4 827 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 AMHP03971 560 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PPP2R1BP30154 601 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 MYL6P60660 151 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 ATP6AP1LQ52LC2 224 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SYTL1Q8IYJ3 562 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 FAM9CQ8IZT9 166 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TDRD5Q8NAT2 981 aaKnown RBP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 RGS18Q9NS28 235 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TBC1D13Q9NVG8 400 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 A8MX80 341 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms