RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 PTPN9P43378 593 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 PGFP49763 221 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 TUBP50607 506 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 NTHL1P78549 312 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 ATP11AP98196 1134 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 OGDHQ02218 1023 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 PIGHQ14442 188 aaPredicted RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 MESDQ14696 234 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CCDC85BQ15834 202 aaPredicted RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CDO1Q16878 200 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 C10orf120Q5SQS8 335 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 HECTD3Q5T447 861 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 SYPL2Q5VXT5 272 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 GPR149Q86SP6 731 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 DAAM2Q86T65 1068 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 RNF10Q8N5U6 811 aaKnown RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CNPY3Q9BT09 278 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 RASAL2Q9UJF2 1139 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 NUDT5Q9UKK9 219 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 MRPS23Q9Y3D9 190 aaKnown RBP12.77□□□□□ -0.37
CCDC163-205ENST00000628397 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
CCDC163-205ENST00000628397 NUP210Q8TEM1 1887 aaPredicted RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SYNJ2BP-COX16A0A087WUM0 186 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 M0QYT0 321 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 KIF5CO60282 957 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 BUB1BO60566 1050 aaPredicted RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 RNF8O76064 485 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 PROSCO94903 275 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 ATP5C1P36542 298 aaKnown RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 ITIH3Q06033 890 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 ZNF252P-AS1Q0IIN9 211 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 EFEMP1Q12805 493 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 COL19A1Q14993 1142 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SLC5A9Q2M3M2 681 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SLC25A52Q3SY17 297 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 CCDC14Q49A88 953 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 GPR158Q5T848 1215 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 C11orf63Q6NUN7 778 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 TAC4Q86UU9 113 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SYCE1Q8N0S2 351 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SHKBP1Q8TBC3 707 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 DQX1Q8TE96 717 aaKnown RBP12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 TBCBQ99426 244 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 NPY6RQ99463 290 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SMOC2Q9H3U7 446 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 SLITRK6Q9H5Y7 841 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 DDIT4Q9NX09 232 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 COX16Q9P0S2 106 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 CLUHO75153 1309 aa12.76□□□□□ -0.37
CCDC163-205ENST00000628397 TRAV19A0A0A6YYK7 116 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 GRID2IPA4D2P6 1211 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 C2orf78A6NCI8 922 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 MDM4O15151 490 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 SPOPO43791 374 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 PALMO75781 387 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 TRUB2O95900 331 aaKnown RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 CKMP06732 381 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 FSHRP23945 695 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 DDX6P26196 483 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 GBP1P32455 592 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 MAN1A1P33908 653 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 RDXP35241 583 aaKnown RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 CCR2P41597 374 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 PITX1P78337 314 aaPredicted RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 DEUP1Q05D60 604 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 NME3Q13232 169 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 ACAP1Q15027 740 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 TEAD2Q15562 447 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 CLUL1Q15846 466 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 PRSS36Q5K4E3 855 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 ATAT1Q5SQI0 421 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 SND1Q7KZF4 910 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 GET4Q7L5D6 327 aaPredicted RBP12.75□□□□□ -0.37
CCDC163-205ENST00000628397 STRADAQ7RTN6 431 aa12.75□□□□□ -0.37
CCDC163-205ENST00000628397 MIB1Q86YT6 1006 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms