RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 VDRP11473 427 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
ATRX-214ENST00000624166 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 SLC44A1Q8WWI5 657 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
ATRX-214ENST00000624166 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 C6orf222P0C671 652 aaPredicted RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 VCLP18206 1134 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 PTGER2P43116 358 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 RFWD3Q6PCD5 774 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 FAM151AQ8WW52 585 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 TSPAN17Q96FV3 270 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 SPATA16Q9BXB7 569 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 PAIP1Q9H074 479 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 PLGRKTQ9HBL7 147 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 DDX4Q9NQI0 724 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 PRPF19Q9UMS4 504 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 KANSL1LA0AUZ9 987 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 H0Y626 953 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 HNRNPRO43390 633 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 TRIM16O95361 564 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 MPOP05164 745 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 CYP2C8P10632 490 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 HADHAP40939 763 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 NEK2P51955 445 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 ARPINQ7Z6K5 226 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 SNX32Q86XE0 403 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 TRPC4APQ8TEL6 797 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 MTMR12Q9C0I1 747 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 COPS7BQ9H9Q2 264 aaPredicted RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 HEATR9A2RTY3 570 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 ALBP02768 609 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 LINGO3P0C6S8 592 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 MRPS22P82650 360 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 KCTD2Q14681 263 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 TCEAL1Q15170 157 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 GRIK5Q16478 980 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 DENND5BQ6ZUT9 1274 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 RNF135Q8IUD6 432 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 CLVS1Q8IUQ0 354 aaPredicted RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 SYT15Q9BQS2 421 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 TXLNGYQ9BZA5 131 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
ATRX-214ENST00000624166 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
ATRX-214ENST00000624166 COX4I1P13073 169 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 MYL6P60660 151 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 RNASEH2BQ5TBB1 312 aaKnown RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 GRTP1Q5TC63 336 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 IER5Q5VY09 327 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PLEKHA7Q6IQ23 1121 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PQLC1Q8N2U9 271 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PPHLN1Q8NEY8 458 aaKnown RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 TSPAN14Q8NG11 270 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 UBA3Q8TBC4 463 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 RXFP2Q8WXD0 754 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CCDC126Q96EE4 140 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 WDR18Q9BV38 432 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CIDEBQ9UHD4 219 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PLLPQ9Y342 182 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 BANF1O75531 89 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CCNG1P51959 295 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 SLC12A1Q13621 1099 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 DDIASQ8IXT1 998 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 IKZF4Q9H2S9 585 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 RRN3Q9NYV6 651 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 DDTLA6NHG4 134 aaPredicted RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 APOA1P02647 267 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 OATP04181 439 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CHRNB2P17787 502 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 TFE3P19532 575 aaPredicted RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 MIPP30301 263 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 UBAP2LQ14157 1087 aaKnown RBP12.17□□□□□ -0.46
ATRX-214ENST00000624166 CLEC4FQ8N1N0 589 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 HELQQ8TDG4 1101 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 ATP11BQ9Y2G3 1177 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 ANGPTL3Q9Y5C1 460 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 CBFA2T3O75081 653 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 USP1O94782 785 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 BPGMP07738 259 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 RARBP10826 455 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 FCGR1AP12314 374 aa12.17□□□□□ -0.46
ATRX-214ENST00000624166 ACADSBP45954 432 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms