RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 ZFP28Q8NHY6 868 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 SLITRK1Q96PX8 696 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 B3GNT4Q9C0J1 378 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 ARMC7Q9H6L4 198 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 TMEM191CA6NGB0 347 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 TFAP2AP05549 437 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 TFPTP0C1Z6 253 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 SMIM18P0DKX4 95 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CHRNB1P11230 501 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 MMP8P22894 467 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 GCAP28676 217 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 ACADSBP45954 432 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 YARSP54577 528 aaKnown RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 BACE1P56817 501 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 SIGIRRQ6IA17 410 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CFAP57Q96MR6 1250 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CADM1Q9BY67 442 aaKnown RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 PITPNM3Q9BZ71 974 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 PSME4Q14997 1843 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 A0A0B4J269 797 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 DNALI1O14645 258 aaPredicted RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 TRMUO75648 421 aaKnown RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 FUCA1P04066 466 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PRKACBP22694 351 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 RAB15P59190 212 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 IL9RQ01113 521 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 OGDHQ02218 1023 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CD300CQ08708 224 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 ZNF252P-AS1Q0IIN9 211 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CDC16Q13042 620 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 ZBTB17Q13105 803 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 NDUFA5Q16718 116 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 RFPL4BQ6ZWI9 263 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 MCEEQ96PE7 176 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PORCNQ9H237 461 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 NFASCO94856 1347 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 ABHD2P08910 425 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 SERPINB6P35237 376 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 TUBA4AP68366 448 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 FSTL1Q12841 308 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 PRKG1Q13976 671 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 MTFR1Q15390 333 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 TRABD2AQ86V40 505 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 METTL25Q8N6Q8 603 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 VPS37BQ9H9H4 285 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
LITAF-221ENST00000622633 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
LITAF-221ENST00000622633 ARL2P36404 184 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 NAMPTP43490 491 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
LITAF-221ENST00000622633 HMGCS2P54868 508 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
LITAF-221ENST00000622633 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 DCUN1D2Q6PH85 259 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 SPOCD1Q6ZMY3 1216 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 ANKMY2Q8IV38 441 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 LRRC37BQ96QE4 947 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 FOXP3Q9BZS1 431 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 TRABDQ9H4I3 376 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 TMEM114B3SHH9 223 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 GOLGA8MH3BSY2 632 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 BANF1O75531 89 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 IFNB1P01574 187 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 PIGRP01833 764 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 POLR2EP19388 210 aaKnown RBP12.88□□□□□ -0.35
LITAF-221ENST00000622633 TCEA1P23193 301 aaKnown RBP12.88□□□□□ -0.35
LITAF-221ENST00000622633 TNFSF9P41273 254 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 ZNF132P52740 706 aa12.88□□□□□ -0.35
LITAF-221ENST00000622633 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms