RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PPM1GO15355 546 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-229ENST00000621897 WDR47O94967 919 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 PARNO95453 639 aaKnown RBP5.22□□□□□ -1.57
BRCA1-229ENST00000621897 TMEM225BP0DP42 221 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 ARP10275 920 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 SLC5A1P13866 664 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 TSHRP16473 764 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 ATICP31939 592 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 YPEL5P62699 121 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 GHRHRQ02643 423 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 CRTC1Q6UUV9 634 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 VSTM1Q6UX27 236 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 KRT28Q7Z3Y7 464 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 RNF152Q8N8N0 203 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 MBD3L2Q8NHZ7 208 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-229ENST00000621897 SUN3Q8TAQ9 357 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 ZBTB9Q96C00 473 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 COQ8BQ96D53 544 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 SAP30LQ9HAJ7 183 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 METTL14Q9HCE5 456 aaKnown RBP5.22□□□□□ -1.57
BRCA1-229ENST00000621897 FZD4Q9ULV1 537 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 AFG3L2Q9Y4W6 797 aa5.22□□□□□ -1.57
BRCA1-229ENST00000621897 THAP12O43422 761 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 CBFA2T3O75081 653 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 RNF8O76064 485 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 GALNSP34059 522 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 THBS4P35443 961 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 PBX1P40424 430 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 NR4A2P43354 598 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 CASP5P51878 434 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 TXNL4AP83876 142 aaKnown RBP5.21□□□□□ -1.58
BRCA1-229ENST00000621897 CFHR1Q03591 330 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 CC2D1BQ5T0F9 858 aaKnown RBP5.21□□□□□ -1.58
BRCA1-229ENST00000621897 SHC4Q6S5L8 630 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 P3H2Q8IVL5 708 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 NANOGP1Q8N7R0 232 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 ATP11CQ8NB49 1132 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 NGDNQ8NEJ9 315 aaKnown RBP5.21□□□□□ -1.58
BRCA1-229ENST00000621897 LRRC46Q96FV0 321 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 VPS50Q96JG6 964 aa5.21□□□□□ -1.58
BRCA1-229ENST00000621897 FOXN3O00409 490 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-229ENST00000621897 FGFR2P21802 821 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 PRIM2P49643 509 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 ZNF91Q05481 1191 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 DNASE1L3Q13609 305 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 ACOX1Q15067 660 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 AASDHQ4L235 1098 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-229ENST00000621897 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 ABLIM2Q6H8Q1 611 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.2□□□□□ -1.58
BRCA1-229ENST00000621897 NRACQ8N912 160 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 FAM71DQ8N9W8 422 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 C9orf106Q8NAJ2 232 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 HIC2Q96JB3 615 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 SIGLEC11Q96RL6 698 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 TMEM184CQ9NVA4 438 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 SEMA5BQ9P283 1151 aa5.2□□□□□ -1.58
BRCA1-229ENST00000621897 C16orf96A6NNT2 1141 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 CLCA1A8K7I4 914 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 RRHO14718 337 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 TMIGD3P0DMS9 266 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 CYP19A1P11511 503 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 RAE1P78406 368 aaKnown RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 CCDC15Q0P6D6 951 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 KPNB1Q14974 876 aaKnown RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 RBMS2Q15434 407 aaKnown RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 TRIM71Q2Q1W2 868 aaKnown RBP5.19□□□□□ -1.58
BRCA1-229ENST00000621897 TMEM63BQ5T3F8 832 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 PXDC1Q5TGL8 231 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 CCDC33Q8N5R6 958 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 C16orf52Q8NHV5 167 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 PIGOQ8TEQ8 1089 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 WDR24Q96S15 920 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 TMEM79Q9BSE2 394 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 MLXIPLQ9NP71 852 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 CHPF2Q9P2E5 772 aa5.19□□□□□ -1.58
BRCA1-229ENST00000621897 APAF1O14727 1248 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 AREL1O15033 823 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 KCNQ3O43525 872 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 BMP15O95972 392 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 FGBP02675 491 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 PRF1P14222 555 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 MST1P26927 711 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 GPS1Q13098 491 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 COBLL1Q53SF7 1204 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 C10orf25Q5T742 122 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 KIAA0408Q6ZU52 694 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 TFAP2DQ7Z6R9 452 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 KRT73Q86Y46 540 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 CUL5Q93034 780 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 TBCBQ99426 244 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 SARGQ9BW04 601 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 CINPQ9BW66 212 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-229ENST00000621897 TM2D2Q9BX73 214 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 VPS4AQ9UN37 437 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 PCDHB2Q9Y5E7 798 aa5.18□□□□□ -1.58
BRCA1-229ENST00000621897 A0A1W2PPC4 97 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms