RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ENDOD1O94919 500 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPNE3-212ENST00000621783 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 FGGP02679 453 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CTAGE8P0CG41 777 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CSH1P0DML2 217 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CSH2P0DML3 217 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 RARAP10276 462 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 KLRC2P26717 231 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 ALDH1A3P47895 512 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 NME3Q13232 169 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 PLD1Q13393 1074 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CAMK1Q14012 370 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 VEPH1Q14D04 833 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 KCNT1Q5JUK3 1230 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 MSANTD2Q6P1R3 559 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 LILRA6Q6PI73 481 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CTAGE6Q86UF2 777 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 MON1AQ86VX9 555 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CTAGE4Q8IX94 777 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 CCDC185Q8N715 623 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 MYRIPQ8NFW9 859 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 TEKT4Q8WW24 435 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 HSPH1Q92598 858 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
CPNE3-212ENST00000621783 SLITRK1Q96PX8 696 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
CPNE3-212ENST00000621783 SMOC2Q9H3U7 446 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 PIGVQ9NUD9 493 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPNE3-212ENST00000621783 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 DDIT4Q9NX09 232 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 COX16Q9P0S2 106 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
CPNE3-212ENST00000621783 ZNF638Q14966 1978 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 MDM4O15151 490 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 IRAK2O43187 625 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 GLUD1P00367 558 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 C8AP07357 584 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 RALAP11233 206 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 HMGA1P17096 107 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 BMP8BP34820 402 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 PTPN7P35236 360 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 PSEN1P49768 467 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 CLCN4P51793 760 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 LONRF2Q1L5Z9 754 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 ODF2Q5BJF6 829 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 PDE12Q6L8Q7 609 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 MFSD7Q6UXD7 560 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 SPOCD1Q6ZMY3 1216 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 SLC13A5Q86YT5 568 aaPredicted RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 KREMEN2Q8NCW0 462 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 SPATA4Q8NEY3 305 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 CMASQ8NFW8 434 aaPredicted RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 RNF139Q8WU17 664 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 PGAP3Q96FM1 320 aaPredicted RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 TRMT2BQ96GJ1 504 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 RPGRIP1Q96KN7 1286 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 CERS4Q9HA82 394 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPNE3-212ENST00000621783 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 AP4E1Q9UPM8 1137 aa11.1□□□□□ -0.63
CPNE3-212ENST00000621783 hCG_1818297A0A087WSY0 165 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 TCRBV7S2A1N4TA0A589 114 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 C3orf70A6NLC5 250 aaPredicted RBP11.09□□□□□ -0.63
CPNE3-212ENST00000621783 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
CPNE3-212ENST00000621783 LRG1P02750 347 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CD48P09326 243 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 RARGP13631 454 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 KDELR1P24390 212 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CDKN2BP42772 138 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 ARSEP51690 589 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 EPHB3P54753 998 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CDH6P55285 790 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 COPS2P61201 443 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 ITIH3Q06033 890 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 KRT81Q14533 505 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CLUL1Q15846 466 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 PPP2R5EQ16537 467 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CA9Q16790 459 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
CPNE3-212ENST00000621783 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
CPNE3-212ENST00000621783 CCDC149Q6ZUS6 474 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms