RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CAPN15O75808 1086 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CLNS1AP54105 237 aaKnown RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 ARSHQ5FYA8 562 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 SUGP1Q8IWZ8 645 aaKnown RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 DEFB106AQ8N104 65 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CAND2O75155 1236 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 SPAG7O75391 227 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 MYL4P12829 197 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 ARHGDIAP52565 204 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 TUSC3Q13454 348 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 KYNUQ16719 465 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 ZRANB3Q5FWF4 1079 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 MARC1Q5VT66 337 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 DENND5BQ6ZUT9 1274 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 SPATA21Q7Z572 469 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 RNF135Q8IUD6 432 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CXorf38Q8TB03 319 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 ANKRD7Q92527 254 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 RIC8BQ9NVN3 520 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 CPSF2Q9P2I0 782 aaKnown RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 ZNF214Q9UL59 606 aaPredicted RBP9.04□□□□□ -0.96
PCDH15-233ENST00000621708 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 RWDD3Q9Y3V2 267 aa9.04□□□□□ -0.96
PCDH15-233ENST00000621708 TGFB1I1O43294 461 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 VPS26AO75436 327 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 RHOBTB1O94844 696 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 LAG3P18627 525 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 NECAB2Q7Z6G3 386 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 PGBD3Q8N328 593 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 DDX20Q9UHI6 824 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 HEATR9A2RTY3 570 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 SOWAHBA6NEL2 793 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 VCLP18206 1134 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ACAT1P24752 427 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ZNF143P52747 638 aaPredicted RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ITGA9Q13797 1035 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 TERF2Q15554 542 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ZNF284Q2VY69 593 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 OLFML2BQ68BL8 750 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 EMC1Q8N766 993 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 NOA1Q8NC60 698 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 B3GALNT2Q8NCR0 500 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 CASKIN2Q8WXE0 1202 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 LENG9Q96B70 501 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 LHX5Q9H2C1 402 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 SMYD3Q9H7B4 428 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 CCDC195A0A1B0GUA6 201 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 APOC4-APOC2K7ER74 178 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 PMPCBO75439 489 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 APOC2P02655 101 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 SERPINF2P08697 491 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 RRP1BQ14684 758 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 LONRF1Q17RB8 773 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 HSP90AA5PQ58FG0 334 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 KDELC2Q7Z4H8 507 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 POLNQ7Z5Q5 900 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 CAVIN3Q969G5 261 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 EPN3Q9H201 632 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 LATS2Q9NRM7 1088 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 MTO1Q9Y2Z2 717 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 CLUHO75153 1309 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 CFLARO15519 480 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 KLHL2O95198 593 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 MAPK8P45983 427 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 KCNA1Q09470 495 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 KCNT1Q5JUK3 1230 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 DSG4Q86SJ6 1040 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 DDIASQ8IXT1 998 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ACTL9Q8TC94 416 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 YY1AP1Q9H869 796 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 SYTL2Q9HCH5 934 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 RAD18Q9NS91 495 aa9.03□□□□□ -0.96
PCDH15-233ENST00000621708 AFF4Q9UHB7 1163 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 G3BP2Q9UN86 482 aaKnown RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 TIMM13Q9Y5L4 95 aaPredicted RBP9.03□□□□□ -0.96
PCDH15-233ENST00000621708 ADH1AP07327 375 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 ARF4P18085 180 aaPredicted RBP9.02□□□□□ -0.96
PCDH15-233ENST00000621708 CDH17Q12864 832 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 DGKZQ13574 1117 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 LBRQ14739 615 aaKnown RBP9.02□□□□□ -0.96
PCDH15-233ENST00000621708 WSCD1Q658N2 575 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 FAM9CQ8IZT9 166 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 LRRC39Q96DD0 335 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 ULBP1Q9BZM6 244 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 PDGFDQ9GZP0 370 aaPredicted RBP9.02□□□□□ -0.96
PCDH15-233ENST00000621708 CYLDQ9NQC7 956 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 PCMTD2Q9NV79 361 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms