RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 STAT4Q14765 748 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 TDRD10Q5VZ19 366 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SPATA31D4Q6ZUB0 917 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 AGAP11Q8TF27 550 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 VCXQ9H320 206 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CCDC134Q9H6E4 229 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 PDGFCQ9NRA1 345 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SUN2Q9UH99 717 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MCM8Q9UJA3 840 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LRRC37AA6NMS7 1700 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 NCOR1O75376 2440 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MYPNQ86TC9 1320 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CEP250Q9BV73 2442 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KIF3CO14782 793 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KRT16P08779 473 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 EEF1B2P24534 225 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 IVDP26440 423 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 PPARGP37231 505 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 RFC5P40937 340 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CENPCQ03188 943 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 LRRC74AQ0VAA2 488 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ACVR2BQ13705 512 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CCNG2Q16589 344 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 FKBP1CQ5VVH2 108 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 RHBDF2Q6PJF5 856 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 METTL7BQ6UX53 244 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 GLIS1Q8NBF1 620 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 NETO2Q8NC67 525 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 TTC8Q8TAM2 541 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 GTF3C2Q8WUA4 911 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 LPPQ93052 612 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 SDCCAG3Q96C92 435 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ERP27Q96DN0 273 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 UTP6Q9NYH9 597 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 RIPK3Q9Y572 518 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CNTNAP1P78357 1384 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ANKRD31Q8N7Z5 1873 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CBX4O00257 560 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 TP73O15350 636 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 PRPF4O43172 522 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 URODP06132 367 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CHRM3P20309 590 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 COG7P83436 770 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 MAMLD1Q13495 774 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CUL2Q13617 745 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 FASTKD3Q14CZ7 662 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 FSCN1Q16658 493 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 PCSK9Q8NBP7 692 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CCHCR1Q8TD31 782 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ABHD16BQ9H3Z7 469 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 TRABDQ9H4I3 376 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 QSER1Q2KHR3 1735 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 A0A1B0GUA9 196 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 GPR182O15218 404 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 EXTL3O43909 919 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 MT-CO1P00395 513 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 TCF4P15884 667 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 NFKBIAP25963 317 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KLRC2P26717 231 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ARHGEF7Q14155 803 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 HIF1AQ16665 826 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 GRAMD1BQ3KR37 738 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 ZRANB3Q5FWF4 1079 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 CCDC60Q8IWA6 550 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KIAA0319LQ8IZA0 1049 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 DCP1BQ8IZD4 617 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 MRPS31Q92665 395 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 WNK4Q96J92 1243 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 KIAA1683Q9H0B3 1180 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 WDCPQ9H6R7 721 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 C10orf88Q9H8K7 445 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 PTPRHQ9HD43 1115 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC38A7Q9NVC3 462 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 UMODL1Q5DID0 1318 aa8.56□□□□□ -1.04
PTPDC1-204ENST00000620992 PMM2O15305 246 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PLA2G6O60733 806 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 BANF1O75531 89 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 WNT7BP56706 349 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SV2CQ496J9 727 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SDHAF4Q5VUM1 108 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MFSD7Q6UXD7 560 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 CARNMT1Q8N4J0 409 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ST13P5Q8NFI4 369 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MAGEB18Q96M61 343 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 TMEM121Q9BTD3 319 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 OSGEPL1Q9H4B0 414 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 UBQLN1Q9UMX0 589 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZSCAN9O15535 394 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms