RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SHC3Q92529 594 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 COX4I2Q96KJ9 171 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 CAMKK2Q96RR4 588 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 SERPINI1Q99574 410 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 GPATCH1Q9BRR8 931 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 ZNF577Q9BSK1 485 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 COA1Q9GZY4 146 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 KLHL25Q9H0H3 589 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 C20orf96Q9NUD7 363 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 FAIMQ9NVQ4 179 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 PIH1D1Q9NWS0 290 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 BRWD3Q6RI45 1802 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 KRT38O76015 456 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 ADRB2P07550 413 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 CD19P15391 556 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 CD97P48960 835 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 EIF3EP60228 445 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 TRIM16LQ309B1 348 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 CYP4A22Q5TCH4 519 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 TTC39BQ5VTQ0 682 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 DEPDC1BQ8WUY9 529 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 ATP2A3Q93084 1043 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 MPHOSPH6Q99547 160 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 TDRD3Q9H7E2 651 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 SLC9A2Q9UBY0 812 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 SERPINB13Q9UIV8 391 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 DAGLAQ9Y4D2 1042 aa10.11□□□□□ -0.79
TNFAIP3-210ENST00000620204 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 ITM2AO43736 263 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 HSPA4LO95757 839 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 S100BP04271 92 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 CDH3P22223 829 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 GNA15P30679 374 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 NUP107P57740 925 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 CEP55Q53EZ4 464 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PERM1Q5SV97 790 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 LDLRAP1Q5SW96 308 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 GPR107Q5VW38 600 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 EGFLAMQ63HQ2 1017 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PCGF5Q86SE9 256 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 KCTD6Q8NC69 237 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PIWIL2Q8TC59 973 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 VTI1AQ96AJ9 217 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 OSBPL6Q9BZF3 934 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 C20orf27Q9GZN8 174 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 TMEM206Q9H813 350 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 DNAJB4Q9UDY4 337 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 THSD7AQ9UPZ6 1657 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 CAPN14A8MX76 684 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 TMEM63AO94886 807 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 HNRNPDQ14103 355 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 SLC26A11Q86WA9 606 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 FBXW8Q8N3Y1 598 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PLEKHO2Q8TD55 490 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 BTBD9Q96Q07 612 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 RNPEPQ9H4A4 650 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PCDH9Q9HC56 1237 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PSMD13Q9UNM6 376 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 NHSQ6T4R5 1651 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 PSTPIP1O43586 416 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 DSG3P32926 999 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 EMP3P54852 163 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 UNC45BQ8IWX7 931 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 RAVER1Q8IY67 606 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 FEZF2Q8TBJ5 459 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 TRIM11Q96F44 468 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 MARK4Q96L34 752 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 SENP6Q9GZR1 1112 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 ANKRD12Q6UB98 2062 aa10.1□□□□□ -0.79
TNFAIP3-210ENST00000620204 ROBO3Q96MS0 1386 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SH3PXD2BA1X283 911 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 STX16-NPEPL1H3BU86 382 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MTA2O94776 668 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 HLA-DOAP06340 250 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 PSMA2P25787 234 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SLC1A6P48664 564 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CSE1LP55060 971 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 TRAF2Q12933 501 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 KLF1Q13351 362 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MAMLD1Q13495 774 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SHROOM1Q2M3G4 852 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SCYL2Q6P3W7 929 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CYP2R1Q6VVX0 501 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 USP37Q86T82 979 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SNX32Q86XE0 403 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CROCCP3Q8IVE0 287 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CERS5Q8N5B7 392 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SPATA18Q8TC71 538 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 RMND5BQ96G75 393 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SLITRK1Q96PX8 696 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 POLR3CQ9BUI4 534 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CCDC106Q9BWC9 280 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 GLT8D2Q9H1C3 349 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms