RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 LRRC37A2A6NM11 1700 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 DPYSL4O14531 572 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 COPEO14579 308 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
TP53-223ENST00000618944 MMP3P08254 477 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 TSHRP16473 764 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 AMPD1P23109 780 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 EPHB2P29323 1055 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 GNL1P36915 607 aaPredicted RBP11.62□□□□□ -0.55
TP53-223ENST00000618944 ETV4P43268 484 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 NEK3P51956 506 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 STILQ15468 1287 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 PRAMEF19Q5SWL8 479 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 TTC39BQ5VTQ0 682 aaPredicted RBP11.62□□□□□ -0.55
TP53-223ENST00000618944 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 TRMT10BQ6PF06 316 aaKnown RBP11.62□□□□□ -0.55
TP53-223ENST00000618944 CCDC185Q8N715 623 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 BEST2Q8NFU1 509 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 APOPT1Q96IL0 206 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 SNX27Q96L92 541 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 RAB3IPQ96QF0 476 aaPredicted RBP11.62□□□□□ -0.55
TP53-223ENST00000618944 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 GOLGA2P5Q9HBQ8 144 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 COX16Q9P0S2 106 aa11.62□□□□□ -0.55
TP53-223ENST00000618944 CFAP69A5D8W1 941 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 C2CD2LO14523 706 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SPTLC1O15269 473 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ADCY6O43306 1168 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 DIAPH2O60879 1101 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ATP5HO75947 161 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 C1QAP02745 245 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 CCNA1P78396 465 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SLC27A1Q6PCB7 646 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 UNC5AQ6ZN44 842 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 TTC39CQ8N584 583 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 TEKT4Q8WW24 435 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 PRR11Q96HE9 360 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 SRPK1Q96SB4 655 aaKnown RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 TRIM55Q9BYV6 548 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 IQCGQ9H095 443 aaKnown RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 LRMDAQ9H2I8 198 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 FBXO6Q9NRD1 293 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 AP4E1Q9UPM8 1137 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 CENPFP49454 3210 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 DYNC1LI2O43237 492 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 RECQL4O94761 1208 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 DESP17661 470 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 CCND1P24385 295 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 EPHX2P34913 555 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SERPINB4P48594 390 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ARFIP2P53365 341 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SLC18A2Q05940 514 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ZBTB6Q15916 424 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 DCAF4L1Q3SXM0 396 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SLC45A4Q5BKX6 768 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 MROH9Q5TGP6 573 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 CLNKQ7Z7G1 428 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 NT5DC4Q86YG4 428 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 UNC5BQ8IZJ1 945 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 KIRREL3Q8IZU9 778 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 VPS52Q8N1B4 723 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 N4BP2L2Q92802 583 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 RTP4Q96DX8 246 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 KCTD15Q96SI1 283 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 TBCBQ99426 244 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ZNF670Q9BS34 389 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 GCOM2Q9BZD3 368 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 NKX1-2Q9UD57 310 aaPredicted RBP11.61□□□□□ -0.55
TP53-223ENST00000618944 COL1A2P08123 1366 aa11.61□□□□□ -0.55
TP53-223ENST00000618944 OTOFQ9HC10 1997 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 CCDC195A0A1B0GUA6 201 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CYB561D2O14569 222 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 MDM4O15151 490 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 GPR32O75388 356 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 SNRPAP09012 282 aaKnown RBP11.6□□□□□ -0.55
TP53-223ENST00000618944 CSH1P0DML2 217 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CSH2P0DML3 217 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 GOT1P17174 413 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 CRADDP78560 199 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 ZBTB16Q05516 673 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 DGKDQ16760 1214 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 DENND5BQ6ZUT9 1274 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 ZNF410Q86VK4 478 aa11.6□□□□□ -0.55
TP53-223ENST00000618944 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms