RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 NRDE2Q9H7Z3 1164 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 CHRNA1P02708 482 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 KCNE1P15382 129 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 ELNP15502 786 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 CA4P22748 312 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 CD52P31358 61 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 GSTCDQ8NEC7 633 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 GDAP2Q9NXN4 497 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
CIITA-212ENST00000618207 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 M0QYT0 321 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 L1CAMP32004 1257 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 PNPLA4P41247 253 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 PDK2Q15119 407 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 BSPRYQ5W0U4 402 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 TRABD2AQ86V40 505 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 LGMNQ99538 433 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 FOXP3Q9BZS1 431 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 ALG13Q9NP73 1137 aaKnown RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 SEPT10Q9P0V9 454 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 RALGAPA2Q2PPJ7 1873 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 CAPN9O14815 690 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 DUSP11O75319 330 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 THP07101 528 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 KRT4P19013 534 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 RPA3P35244 121 aaPredicted RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 TKTL1P51854 596 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 SLC8A3P57103 927 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 TP53INP2Q8IXH6 220 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
CIITA-212ENST00000618207 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 ETNK1Q9HBU6 452 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 TMEM30AQ9NV96 361 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 NRP1O14786 923 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 FAM155BO75949 473 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 YY1P25490 414 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 GRIA1P42261 906 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 SNX16P57768 344 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 PRKCZQ05513 592 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 FAM133BQ5BKY9 247 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 C6orf89Q6UWU4 347 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 EDEM1Q92611 657 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 PPP1R10Q96QC0 940 aaKnown RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
CIITA-212ENST00000618207 CRTAC1Q9NQ79 661 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
CIITA-212ENST00000618207 PDCD11Q14690 1871 aaKnown RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 C5orf60A6NFR6 353 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 F8W810 466 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 DNM1LO00429 736 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 DPYSL4O14531 572 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 TCEA3O75764 348 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 AP1G2O75843 785 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 B3GAT3O94766 335 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 METTL18O95568 372 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 ASGR1P07306 291 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 ABHD2P08910 425 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 NPR3P17342 541 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 BRCC3P46736 316 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 CAP1Q01518 475 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 PCBP1Q15365 356 aaKnown RBP eCLIP12.87□□□□□ -0.35
CIITA-212ENST00000618207 KBTBD12Q3ZCT8 623 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 CEP128Q6ZU80 1094 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 GPRIN1Q7Z2K8 1008 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 AGGF1Q8N302 714 aaeCLIP12.87□□□□□ -0.35
CIITA-212ENST00000618207 NME8Q8N427 588 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 CCNYQ8ND76 341 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms