RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 MARK1Q9P0L2 795 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 RWDD2AQ9UIY3 292 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 STRIP2Q9ULQ0 834 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 ATG2BQ96BY7 2078 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 GPR179Q6PRD1 2367 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 PRR5-ARHGAP8B1AHC4 643 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 NEDD8-MDP1E9PL57 170 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 TULP2O00295 520 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 STC2O76061 302 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 SDHBP21912 280 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 DGKEP52429 567 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 ARHGAP8P85298 464 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 GCNT1Q02742 428 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 STILQ15468 1287 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 LCLAT1Q6UWP7 414 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 Q6ZNB5 142 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 TPGS1Q6ZTW0 290 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 SFTPA1Q8IWL2 248 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 ALLCQ8N6M5 410 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 UBA3Q8TBC4 463 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 LOXL4Q96JB6 756 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 IPO9Q96P70 1041 aaKnown RBP26.45■■□□□ 1.82
VEGFA-228ENST00000617771 DCLK3Q9C098 648 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 ZNF292O60281 2723 aa26.45■■□□□ 1.82
VEGFA-228ENST00000617771 KLF8O95600 359 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-228ENST00000617771 TYRP14679 529 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 KIR2DL1P43626 348 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-228ENST00000617771 ADIGQ0VDE8 80 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 PUM1Q14671 1186 aaKnown RBP eCLIP26.44■■□□□ 1.821e-7■■■□□ 15.4
VEGFA-228ENST00000617771 CRY1Q16526 586 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 EOGTQ5NDL2 527 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 GRAMD4Q6IC98 578 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 RRAGAQ7L523 313 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 ERMP1Q7Z2K6 904 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 TRMT11Q7Z4G4 463 aaKnown RBP26.44■■□□□ 1.82
VEGFA-228ENST00000617771 KBTBD6Q86V97 674 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 SIX6OS1Q8N1H7 587 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 TERB1Q8NA31 727 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 IL17RCQ8NAC3 791 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 TXNDC5Q8NBS9 432 aaKnown RBP26.44■■□□□ 1.82
VEGFA-228ENST00000617771 KCNV2Q8TDN2 545 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 KCTD13Q8WZ19 329 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 KAT5Q92993 513 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 DNAJC17Q9NVM6 304 aaKnown RBP26.44■■□□□ 1.82
VEGFA-228ENST00000617771 MARCH2Q9P0N8 246 aa26.44■■□□□ 1.82
VEGFA-228ENST00000617771 ANTXRLA6NF34 631 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 CACNG3O60359 315 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 ALDH1A2O94788 518 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 FOXK2Q01167 660 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 CNGA2Q16280 664 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 RSPO4Q2I0M5 234 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-228ENST00000617771 OLA1Q9NTK5 396 aaKnown RBP26.43■■□□□ 1.82
VEGFA-228ENST00000617771 SEMA4GQ9NTN9 838 aa26.43■■□□□ 1.82
VEGFA-228ENST00000617771 HMBSP08397 361 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 ANP32AP39687 249 aaKnown RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 CSRP2Q16527 193 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 PKDCCQ504Y2 493 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 C10orf76Q5T2E6 689 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 EMC10Q5UCC4 262 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 ANO7Q6IWH7 933 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 RASSF3Q86WH2 238 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 ARHGEF19Q8IW93 802 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 RBBP8NLQ8NC74 664 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 TFAP2BQ92481 460 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 ZC3H10Q96K80 434 aaKnown RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 CNOT6LQ96LI5 555 aaKnown RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 INTS2Q9H0H0 1204 aaKnown RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 POLMQ9NP87 494 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 DLL3Q9NYJ7 618 aa26.42■■□□□ 1.82
VEGFA-228ENST00000617771 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.42■■□□□ 1.82
VEGFA-228ENST00000617771 SLC12A8A0AV02 714 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 RNF225M0QZC1 329 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 SGK1O00141 431 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 FOXD2O60548 495 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 CHRM1P11229 460 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 CORO1AP31146 461 aaKnown RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 CHKAP35790 457 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 ELF2Q15723 593 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 USP39Q53GS9 565 aaKnown RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 C11orf74Q86VG3 221 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 SCML4Q8N228 414 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 ZNF513Q8N8E2 541 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-228ENST00000617771 MLKLQ8NB16 471 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 RNF139Q8WU17 664 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 CNGB3Q9NQW8 809 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 MYOFQ9NZM1 2061 aa26.41■■□□□ 1.82
VEGFA-228ENST00000617771 M0QYV0 167 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 EPN2O95208 641 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 KLKB1P03952 638 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 BRD2P25440 801 aaKnown RBP26.4■■□□□ 1.82
VEGFA-228ENST00000617771 PLK5Q496M5 336 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 TMEM92Q6UXU6 159 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 BHLHA9Q7RTU4 235 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 CREBRFQ8IUR6 639 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 NDRG1Q92597 394 aaKnown RBP26.4■■□□□ 1.82
VEGFA-228ENST00000617771 PLD4Q96BZ4 506 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 TPSD1Q9BZJ3 242 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 CDV3Q9UKY7 258 aaKnown RBP26.4■■□□□ 1.82
VEGFA-228ENST00000617771 STARD13Q9Y3M8 1113 aa26.4■■□□□ 1.82
VEGFA-228ENST00000617771 RHOBTB1O94844 696 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms