RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 TMEM86AQ8N2M4 240 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 GALNT15Q8N3T1 639 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 FOXJ1Q92949 421 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 SPATA17Q96L03 361 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 ACOX2Q99424 681 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 TSG101Q99816 390 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 SLC6A17Q9H1V8 727 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 CD248Q9HCU0 757 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 PANK4Q9NVE7 773 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 MAGEC2Q9UBF1 373 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 AGAP1Q9UPQ3 857 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 A0A1B0GTW7 788 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 NRDCO43847 1150 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 TULP3O75386 442 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 ABL1P00519 1130 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 GAP43P17677 238 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 ITPKBP27987 946 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZNF75DP51815 510 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 GTF2BQ00403 316 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 GAD2Q05329 585 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 EGFLAMQ63HQ2 1017 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 CRELD2Q6UXH1 353 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZNF843Q8N446 348 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 PDCD7Q8N8D1 485 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 GAREM1Q9H706 876 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 MRPL44Q9H9J2 332 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 TM7SF3Q9NS93 570 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 DEC1Q9P2X7 70 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 AGO2Q9UKV8 859 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 FNDC3AQ9Y2H6 1198 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
TRAPPC3-209ENST00000616395 TULP1O00294 542 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 TRIM24O15164 1050 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 CILPO75339 1184 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 PPP1R37O75864 691 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 GCNT3O95395 438 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 OAS1P00973 400 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 ITGB3P05106 788 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZNF883P0CG24 379 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 SCP2P22307 547 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 PCSK1P29120 753 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 GRIK1P39086 918 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 BTBD8Q5XKL5 378 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 FAM171BQ6P995 826 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 DENND5BQ6ZUT9 1274 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 ADGRF2Q8IZF7 708 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZCCHC9Q8N567 271 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 TERB1Q8NA31 727 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 RHBDD1Q8TEB9 315 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 NELFBQ8WX92 580 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 CDC6Q99741 560 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 TTLL2Q9BWV7 592 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 TBC1D14Q9P2M4 693 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 CTNND2Q9UQB3 1225 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 CFAP46Q8IYW2 2715 aa18.62■□□□□ 0.57
TRAPPC3-209ENST00000616395 FRMD3A2A2Y4 597 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 PPP1R3GB7ZBB8 358 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 GABRDO14764 452 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 HOXC11O43248 304 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 KLRC4O43908 158 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 BMP6P22004 513 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 BDNFP23560 247 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 LHX1P48742 406 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 WNT7BP56706 349 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 PSMC1P62191 440 aaKnown RBP18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 PREPLQ4J6C6 727 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 C4orf50Q6ZRC1 276 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZNF720Q7Z2F6 126 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 CHPFQ8IZ52 775 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 C1orf127Q8N9H9 656 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 DNASE2BQ8WZ79 361 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 MYLPFQ96A32 169 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 MRGPRX1Q96LB2 322 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 MIR1-1HGQ9H1L0 117 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 PRORYQ9H606 182 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 STARD13Q9Y3M8 1113 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 SNX9Q9Y5X1 595 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 RAD54BQ9Y620 910 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 SHROOM3Q8TF72 1996 aa18.61■□□□□ 0.57
TRAPPC3-209ENST00000616395 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 MEI4A8MW99 385 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 IL18RAPO95256 599 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 CER1O95813 267 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 MBL2P11226 248 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 MATKP42679 507 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 PPP3CCP48454 512 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 FANCCQ00597 558 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 POU5F1Q01860 360 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 BNC1Q01954 994 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 NCAPHQ15003 741 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 HLA-BQ31612 363 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 SLFN12LQ6IEE8 588 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 SDE2Q6IQ49 451 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 KIAA1324Q6UXG2 1013 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 DBX2Q6ZNG2 339 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms