RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CLNKQ7Z7G1 428 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RPAINQ86UA6 219 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 USP33Q8TEY7 942 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 GAD1Q99259 594 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNPEPL1Q9HAU8 725 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PCDH18Q9HCL0 1135 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 PCDHGC3Q9UN70 934 aa5.83□□□□□ -1.48
SYNCRIP-204ENST00000616122 C5P01031 1676 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TGM2P21980 687 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 IL1R2P27930 398 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 KPNA2P52292 529 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ALDH18A1P54886 795 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 KLF1Q13351 362 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RIPK1Q13546 671 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ITGA9Q13797 1035 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 DBN1Q16643 649 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZC3H12AQ5D1E8 599 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PMF1Q6P1K2 205 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 BBS5Q8N3I7 341 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADAM32Q8TC27 787 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRRN4Q8WUT4 740 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PABPC5Q96DU9 382 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RMDN2Q96LZ7 410 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM193BQ96PV7 902 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PLEKHA5Q9HAU0 1116 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TXNRD2Q9NNW7 524 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LGALS13Q9UHV8 139 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 C15orf41Q9Y2V0 281 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 EEF2KO00418 725 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PMPCBO75439 489 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 MICAL2O94851 1124 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LMNAP02545 664 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ERCC2P18074 760 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 GRK2P25098 689 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 GTF2A2P52657 109 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 USP10Q14694 798 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RASA2Q15283 850 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRIP10Q15642 601 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRRC36Q1X8D7 754 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LACTB2Q53H82 288 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 FASTKD1Q53R41 847 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SNX30Q5VWJ9 437 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 BTBD8Q5XKL5 378 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 NPNTQ6UXI9 565 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 KDELC2Q7Z4H8 507 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRRC52Q8N7C0 313 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC4A11Q8NBS3 891 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RAB3IL1Q8TBN0 382 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRCCQ92733 491 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 XYLT2Q9H1B5 865 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRIM33Q9UPN9 1127 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SSX2IPQ9Y2D8 614 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 CRYBG1Q9Y4K1 1723 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 CNTNAP2Q9UHC6 1331 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SRCAPQ6ZRS2 3230 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARFGEF2Q9Y6D5 1785 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PAPSS1O43252 624 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 DNAJC8O75937 253 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRAMEP78395 509 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 MMEL1Q495T6 779 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZCCHC23Q6ZST2 131 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC26A9Q7LBE3 791 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ANKRD52Q8NB46 1076 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PIWIL2Q8TC59 973 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 APOPT1Q96IL0 206 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PARK7Q99497 189 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 EBNA1BP2Q99848 306 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 FSD1LQ9BXM9 530 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRRC40Q9H9A6 602 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SIX4Q9UIU6 781 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNF103O00237 685 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAP3K7O43318 606 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 OPHN1O60890 802 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATP6V1G2O95670 118 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 MYL3P08590 195 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RALBP11234 206 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ABCG1P45844 678 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SULT1E1P49888 294 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TKTL1P51854 596 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 NAGLUP54802 743 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARPP19P56211 112 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 HIC1Q14526 733 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 DCAF4L1Q3SXM0 396 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 DNAL1Q4LDG9 190 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 HSP90AA5PQ58FG0 334 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 FSCBQ5H9T9 825 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 NAPEPLDQ6IQ20 393 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 TSHZ1Q6ZSZ6 1077 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 RYBPQ8N488 228 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 PCDH19Q8TAB3 1148 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 GTF3C2Q8WUA4 911 aaPredicted RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 CCDC134Q9H6E4 229 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 NRDE2Q9H7Z3 1164 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 UBP1Q9NZI7 540 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 STARD13Q9Y3M8 1113 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 SMIM28A0A1B0GU29 152 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 FZD9O00144 591 aa5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 NVLO15381 856 aaKnown RBP5.82□□□□□ -1.48
SYNCRIP-204ENST00000616122 KRT16P08779 473 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms