RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 BNIP3Q12983 259 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 CYP2A13Q16696 494 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ALLCQ8N6M5 410 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 C12orf43Q96C57 262 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 CDRT15Q96T59 188 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SERPINB13Q9UIV8 391 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 NOCTQ9UK39 431 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SIN3BO75182 1162 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ESRRBO95718 433 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 TKTP29401 623 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SMAD1Q15797 465 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 RNASEH2BQ5TBB1 312 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 VWA5B1Q5TIE3 1220 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 GPR107Q5VW38 600 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 PDPK2PQ6A1A2 396 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ADGRF4Q8IZF3 695 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SPATA17Q96L03 361 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 NT5C1BQ96P26 610 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ATAD3AQ9NVI7 634 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 DAPK2Q9UIK4 370 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 PCDHA1Q9Y5I3 950 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 CPA3P15088 417 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZNF23P17027 643 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SERPINB5P36952 375 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 HSPA13P48723 471 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 RHBDL3P58872 404 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 RPL10AP62906 217 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 TRAF2Q12933 501 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 PERM1Q5SV97 790 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 FRMD7Q6ZUT3 714 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 PPIL6Q8IXY8 311 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 MYO1HQ8N1T3 1032 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 C7orf26Q96N11 449 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 TPK1Q9H3S4 243 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 MAN1C1Q9NR34 630 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 SACM1LQ9NTJ5 587 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 GIN1Q9NXP7 522 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 BCAP29Q9UHQ4 241 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 POLIQ9UNA4 740 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 CDC14AQ9UNH5 594 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 ROBO3Q96MS0 1386 aa10.72□□□□□ -0.69
TNFAIP3-208ENST00000615468 A0A1W2PPW3 197 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 PROSCO94903 275 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 KRT75O95678 551 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 PIM1P11309 404 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 ETV4P43268 484 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 EIF3EP60228 445 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 RPL26P61254 145 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SPIDRQ14159 915 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SLC15A2Q16348 729 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 HSF5Q4G112 596 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 DCUN1D2Q6PH85 259 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 BHLHE22Q8NFJ8 381 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 HSPH1Q92598 858 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 NSMCE3Q96MG7 304 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 KREMEN1Q96MU8 473 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 NEURL2Q9BR09 285 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 NRDE2Q9H7Z3 1164 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SF3B1O75533 1304 aaKnown RBP eCLIP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 KBTBD13C9JR72 458 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 PLSCR1O15162 318 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SNRPAP09012 282 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SPATA31C1P0DKV0 1188 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 IL1R1P14778 569 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 ITGAXP20702 1163 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 RPL10P27635 214 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 MAP4P27816 1152 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 RCVRNP35243 200 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 PFKPQ01813 784 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZNF829Q3KNS6 432 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 BORAQ6PGQ7 559 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 KBTBD6Q86V97 674 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 FAM71AQ8IYT1 594 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 CXorf38Q8TB03 319 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 ACTRT2Q8TDY3 377 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 STARD8Q92502 1023 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 CCDC138Q96M89 665 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 EIF2AK1Q9BQI3 630 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 SLC38A7Q9NVC3 462 aa10.71□□□□□ -0.69
TNFAIP3-208ENST00000615468 hCG_1984214I3L0E3 225 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 CYP2C9P11712 490 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 AOC1P19801 751 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 KCNA4P22459 653 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 NDST2P52849 883 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 GNA12Q03113 381 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 ADGRE1Q14246 886 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 BMT2Q1RMZ1 405 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 C16orf46Q6P387 395 aa10.71□□□□□ -0.7
TNFAIP3-208ENST00000615468 MCOLN2Q8IZK6 566 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms