RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RBP3P10745 1247 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 RPL22P35268 128 aaKnown RBP19.9■□□□□ 0.78
MMP28-204ENST00000615136 ACADSBP45954 432 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 SNX16P57768 344 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 FASTKD3Q14CZ7 662 aaKnown RBP19.9■□□□□ 0.78
MMP28-204ENST00000615136 PPP6R3Q5H9R7 873 aaPredicted RBP19.9■□□□□ 0.78
MMP28-204ENST00000615136 HP1BP3Q5SSJ5 553 aaPredicted RBP19.9■□□□□ 0.78
MMP28-204ENST00000615136 ANKRD22Q5VYY1 191 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 HFE2Q6ZVN8 426 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 GPRIN1Q7Z2K8 1008 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 RTN4RL1Q86UN2 441 aaPredicted RBP19.9■□□□□ 0.78
MMP28-204ENST00000615136 ZMIZ2Q8NF64 920 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 RAET1EQ8TD07 263 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 TSC2P49815 1807 aa19.9■□□□□ 0.78
MMP28-204ENST00000615136 B4GALT3O60512 393 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 CKBP12277 381 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 LRRC14Q15048 493 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 NOMO1Q15155 1222 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 LHX8Q68G74 356 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 TAX1BP1Q86VP1 789 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 TDRPQ86YL5 185 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 TEKT4Q8WW24 435 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 DYDC1Q8WWB3 177 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 CKAP2Q8WWK9 683 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 SMOQ99835 787 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 MAK16Q9BXY0 300 aaKnown RBP19.89■□□□□ 0.77
MMP28-204ENST00000615136 PHACTR1Q9C0D0 580 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 TMPRSS4Q9NRS4 437 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 MTMR10Q9NXD2 777 aa19.89■□□□□ 0.77
MMP28-204ENST00000615136 CCT8L1PA6NM43 557 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 NRP1O14786 923 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 BANF1O75531 89 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 SCNN1AP37088 669 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 MPP2Q14168 576 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 FAM35AQ86V20 835 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 PYROXD2Q8N2H3 581 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 MGARPQ8TDB4 240 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 MAML1Q92585 1016 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 PRCCQ92733 491 aaPredicted RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 FAM149B1Q96BN6 582 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.88■□□□□ 0.77
MMP28-204ENST00000615136 FARP1Q9Y4F1 1045 aaPredicted RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 TCRBV7S3A2A0A539 114 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 GOLGA8MH3BSY2 632 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 MDM4O15151 490 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 SNX3O60493 162 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 B3GAT3O94766 335 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 INHAP05111 366 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 GCAP28676 217 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 L1CAMP32004 1257 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 RAB27AP51159 221 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 MRPS5P82675 430 aaKnown RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 PDK2Q15119 407 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 SYPL2Q5VXT5 272 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 ARCQ7LC44 396 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 ZNF598Q86UK7 904 aaKnown RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 ECHDC2Q86YB7 292 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 TMEM86AQ8N2M4 240 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 RSAD2Q8WXG1 361 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 CPT1BQ92523 772 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 ELAC2Q9BQ52 826 aaKnown RBP19.88■□□□□ 0.77
MMP28-204ENST00000615136 TBK1Q9UHD2 729 aa19.88■□□□□ 0.77
MMP28-204ENST00000615136 EXOC1LA0A1B0GW35 172 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 FOXO6A8MYZ6 492 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 MCF2LO15068 1137 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 FAM163BP0C2L3 166 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 FAM200BP0CF97 657 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 RPL9P32969 192 aaKnown RBP19.87■□□□□ 0.77
MMP28-204ENST00000615136 MATKP42679 507 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 SCTRP47872 440 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 LHX1P48742 406 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 CTCFP49711 727 aaPredicted RBP19.87■□□□□ 0.77
MMP28-204ENST00000615136 TKTL1P51854 596 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 NR1H3Q13133 447 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 EFHC1Q5JVL4 640 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 FAM131BQ86XD5 332 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 SRRM1Q8IYB3 904 aaKnown RBP19.87■□□□□ 0.77
MMP28-204ENST00000615136 LINC01599Q8WXQ3 324 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 KCTD15Q96SI1 283 aaPredicted RBP19.87■□□□□ 0.77
MMP28-204ENST00000615136 CFHR5Q9BXR6 569 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 DHX35Q9H5Z1 703 aaKnown RBP19.87■□□□□ 0.77
MMP28-204ENST00000615136 KCNK9Q9NPC2 374 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 HEY1Q9Y5J3 304 aa19.87■□□□□ 0.77
MMP28-204ENST00000615136 ALOX15BO15296 676 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 AP1G2O75843 785 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 YY1P25490 414 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 HNRNPH1P31943 449 aaKnown RBP19.86■□□□□ 0.77
MMP28-204ENST00000615136 SULT1E1P49888 294 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 MTM1Q13496 603 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 DCAF6Q58WW2 860 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 SLC9A4Q6AI14 798 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 ARHGEF18Q6ZSZ5 1173 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 PCGF5Q86SE9 256 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 MAP7D3Q8IWC1 876 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 SUGP1Q8IWZ8 645 aaKnown RBP19.86■□□□□ 0.77
MMP28-204ENST00000615136 CCDC33Q8N5R6 958 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 ANKRD42Q8N9B4 389 aa19.86■□□□□ 0.77
MMP28-204ENST00000615136 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.86■□□□□ 0.77
MMP28-204ENST00000615136 KCTD13Q8WZ19 329 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms