RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 MYBPC2Q14324 1141 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 PRPSAP1Q14558 356 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 PPM1JQ5JR12 505 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
CDH5-208ENST00000614547 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 DRAXINQ8NBI3 349 aaPredicted RBP12.18□□□□□ -0.46
CDH5-208ENST00000614547 DDX1Q92499 740 aaKnown RBP12.18□□□□□ -0.46
CDH5-208ENST00000614547 ZNF516Q92618 1163 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 MOCOSQ96EN8 888 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 ANKRD36BP1Q96IX9 119 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 RNF146Q9NTX7 359 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 RNF19AQ9NV58 838 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 DNAAF2Q9NVR5 837 aaKnown RBP12.18□□□□□ -0.46
CDH5-208ENST00000614547 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
CDH5-208ENST00000614547 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
CDH5-208ENST00000614547 RNF103-CHMP3A0A140T963 221 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 WDR27A2RRH5 827 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 APOL1O14791 398 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 TP73O15350 636 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 AVPR1AP37288 418 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 IFNEQ86WN2 208 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 NIM1KQ8IY84 436 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 PDZD8Q8NEN9 1154 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 DCAKDQ8WVC6 231 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 PTCD3Q96EY7 689 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 WDR55Q9H6Y2 383 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 TLK1Q9UKI8 766 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 TMEM191CA6NGB0 347 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 MAGEB2O15479 319 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ITM2AO43736 263 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 TMCC1O94876 653 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 RALBP11234 206 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ADRA2BP18089 450 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 MLH1P40692 756 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 TNFSF9P41273 254 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CDKN2BP42772 138 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CCR3P51677 355 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ACTR3P61158 418 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CCDC14Q49A88 953 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ANKRD20A4Q4UJ75 823 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 LRRC8EQ6NSJ5 796 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 B3GNT6Q6ZMB0 384 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 UTS2BQ765I0 119 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 MYLK4Q86YV6 388 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 PIWIL2Q8TC59 973 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 STRIP2Q9ULQ0 834 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 MAGEB3O15480 346 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 NME5P56597 212 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ATP1A4Q13733 1029 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 EMC2Q15006 297 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 PRKD1Q15139 912 aaPredicted RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 GRAMD4Q6IC98 578 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CMC1Q7Z7K0 106 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 FAM160B2Q86V87 743 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ZNF354CQ86Y25 554 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 XPNPEP1Q9NQW7 623 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 ZNF358Q9NW07 568 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 LMCD1Q9NZU5 365 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 THEGQ9P2T0 379 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 BCAP29Q9UHQ4 241 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 HBS1LQ9Y450 684 aaKnown RBP12.17□□□□□ -0.46
CDH5-208ENST00000614547 AP4B1Q9Y6B7 739 aa12.17□□□□□ -0.46
CDH5-208ENST00000614547 HMGCRP04035 888 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 NUMBP49757 651 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 CCNG1P51959 295 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
CDH5-208ENST00000614547 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SH3PXD2AQ5TCZ1 1133 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 LPCAT2Q7L5N7 544 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 RNF149Q8NC42 400 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 THAP1Q9NVV9 213 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 PAK5Q9P286 719 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 COL18A1P39060 1754 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 DGAT1O75907 488 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ITGAVP06756 1048 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms