RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 UGT1A10Q9HAW8 530 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 UGT1A8Q9HAW9 530 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
MSH6-213ENST00000614496 CNGA3Q16281 694 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 EFHC1Q5JVL4 640 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 KCNT2Q6UVM3 1135 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 FBXO16Q8IX29 292 aaPredicted RBP12.97□□□□□ -0.33
MSH6-213ENST00000614496 SGF29Q96ES7 293 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
MSH6-213ENST00000614496 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SOX13Q9UN79 622 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 PHLPP1O60346 1717 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 DCXO43602 365 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 IL18RAPO95256 599 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 MLH1P40692 756 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SLC1A6P48664 564 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 NUDT2P50583 147 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 CYTH1Q15438 398 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 ANO7Q6IWH7 933 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 RWDD4Q6NW29 188 aaKnown RBP12.97□□□□□ -0.33
MSH6-213ENST00000614496 TLDC1Q6P9B6 456 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 CEP70Q8NHQ1 597 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SLC44A1Q8WWI5 657 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 EXT2Q93063 718 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
MSH6-213ENST00000614496 RNF157Q96PX1 679 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 PFDN1O60925 122 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 MGAT1P26572 445 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 GLRBP48167 497 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
MSH6-213ENST00000614496 EML3Q32P44 896 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 WDR60Q8WVS4 1066 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 CMTM5Q96DZ9 223 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 PHACTR1Q9C0D0 580 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 MAN1C1Q9NR34 630 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 KCNK4Q9NYG8 393 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
MSH6-213ENST00000614496 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 TBC1D12O60347 775 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 TBX10O75333 385 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 ZFXP17010 805 aaPredicted RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 RANBP1P43487 201 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 RTP1P59025 263 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 SLC7A6OSQ96CW6 309 aaPredicted RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 ACO2Q99798 780 aaKnown RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 AP4E1Q9UPM8 1137 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 RALBP11234 206 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 MOGSQ13724 837 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 ACAD11Q709F0 780 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 ASRGL1Q7L266 308 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 IGDCC3Q8IVU1 814 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 ULK2Q8IYT8 1036 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 TFB1MQ8WVM0 346 aaKnown RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 COPS5Q92905 334 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 UTP4Q969X6 686 aaKnown RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 NMD3Q96D46 503 aaKnown RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 PDP2Q9P2J9 529 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
MSH6-213ENST00000614496 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
MSH6-213ENST00000614496 GOLGA8TH3BQL2 631 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 KCNK1O00180 336 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 GSTA2P09210 222 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 ANPEPP15144 967 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 PDK2Q15119 407 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 PDPK2PQ6A1A2 396 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.34
MSH6-213ENST00000614496 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 PPP1R13LQ8WUF5 828 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 MMP19Q99542 508 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 SNRNP25Q9BV90 132 aaKnown RBP12.96□□□□□ -0.34
MSH6-213ENST00000614496 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.34
MSH6-213ENST00000614496 THAP1Q9NVV9 213 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 ZNF212Q9UDV6 495 aa12.96□□□□□ -0.34
MSH6-213ENST00000614496 TYROBPO43914 113 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 GLRA3O75311 464 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 KRT80Q6KB66 452 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 TRIML2Q8N7C3 387 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 NAT8LQ8N9F0 302 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 SMARCAD1Q9H4L7 1026 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 UBP1Q9NZI7 540 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 KLK14Q9P0G3 267 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms