RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SYT11Q9BT88 431 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 PLA2G2FQ9BZM2 168 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 SLC2A4RGQ9NR83 387 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 ABHD10Q9NUJ1 306 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 NCOR1O75376 2440 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 E2F8A0AVK6 867 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 ANKRD62A6NC57 917 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 GOLGA8SH3BPF8 625 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 ADCY5O95622 1261 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 GZMAP12544 262 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 CDC25BP30305 580 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 ADKP55263 362 aaKnown RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 GPC5P78333 572 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 ARID5BQ14865 1188 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 PDGFRLQ15198 375 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 MSANTD2Q6P1R3 559 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 ZFRQ96KR1 1074 aaKnown RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 KLF16Q9BXK1 252 aaPredicted RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 DCLK3Q9C098 648 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
MDC1-209ENST00000613547 HBS1LQ9Y450 684 aaKnown RBP13.86□□□□□ -0.19
MDC1-209ENST00000613547 TCF20Q9UGU0 1960 aaKnown RBP13.85□□□□□ -0.19
MDC1-209ENST00000613547 SLC12A8A0AV02 714 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 FAM170AA1A519 330 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.19
MDC1-209ENST00000613547 MDM4O15151 490 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 NARSO43776 548 aaKnown RBP13.85□□□□□ -0.19
MDC1-209ENST00000613547 RTN2O75298 545 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DAB1O75553 588 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 GBP1P32455 592 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 ZXDAP98168 799 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 CDK17Q00537 523 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 C2CD6Q53TS8 623 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 MON1BQ7L1V2 547 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 OSCP1Q8WVF1 389 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 EDAQ92838 391 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 PLD4Q96BZ4 506 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 OTUB2Q96DC9 234 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 TRIM11Q96F44 468 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 VCPIP1Q96JH7 1222 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 LRRC3BQ96PB8 259 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 SMOC2Q9H3U7 446 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 TRPV5Q9NQA5 729 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 GKN1Q9NS71 199 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 TMEM51Q9NW97 253 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
MDC1-209ENST00000613547 RRN3Q9NYV6 651 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 NAALADL1Q9UQQ1 740 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 ZNF510Q9Y2H8 683 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 GREB1Q4ZG55 1949 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
MDC1-209ENST00000613547 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 MYH10P35580 1976 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 SSU72P8A0A1W2PR75 194 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 GRAP2O75791 330 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 HMBSP08397 361 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 NOS2P35228 1153 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 MATKP42679 507 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 HARS2P49590 506 aaKnown RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 SIGLEC14Q08ET2 396 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 NR1H3Q13133 447 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 TAF5Q15542 800 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 TRIP4Q15650 581 aaPredicted RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 DNAJC24Q6P3W2 148 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 ARCQ7LC44 396 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 MCOLN2Q8IZK6 566 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 DEFB106AQ8N104 65 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 CPA6Q8N4T0 437 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 DQX1Q8TE96 717 aaKnown RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 PIWIL1Q96J94 861 aaKnown RBP13.84□□□□□ -0.19
MDC1-209ENST00000613547 CCDC42Q96M95 316 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 SLC2A13Q96QE2 648 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 SELENOOQ9BVL4 669 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 FAM204AQ9H8W3 233 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.84□□□□□ -0.19
MDC1-209ENST00000613547 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 WNT16Q9UBV4 365 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 WNT6Q9Y6F9 365 aa13.84□□□□□ -0.19
MDC1-209ENST00000613547 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms