RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 DESP17661 470 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 RDXP35241 583 aaKnown RBP14.87□□□□□ -0.03
USP39-220ENST00000613444 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
USP39-220ENST00000613444 MRPS25P82663 173 aaKnown RBP14.87□□□□□ -0.03
USP39-220ENST00000613444 SHHQ15465 462 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 ZC3H12AQ5D1E8 599 aaKnown RBP14.87□□□□□ -0.03
USP39-220ENST00000613444 MON1AQ86VX9 555 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 SLC7A14Q8TBB6 771 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 ADAM32Q8TC27 787 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 MAGEB5Q9BZ81 275 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP39-220ENST00000613444 ABCC13Q9NSE7 274 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 GPATCH2LQ9NWQ4 482 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 MTMR10Q9NXD2 777 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 EFR3BQ9Y2G0 817 aa14.87□□□□□ -0.03
USP39-220ENST00000613444 CDH23Q9H251 3354 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 ANAPC1Q9H1A4 1944 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 A0A1W2PQH9 124 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 GRXCR1A8MXD5 290 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 I6L893 689 aaPredicted RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 IL4RP24394 825 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 TUFMP49411 452 aaKnown RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 ZFYVE27Q5T4F4 411 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 ERMARDQ5T6L9 678 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 FAM131BQ86XD5 332 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 KLHL7Q8IXQ5 586 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 DQX1Q8TE96 717 aaKnown RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 PNKPQ96T60 521 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 C17orf80Q9BSJ5 609 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 TRIM62Q9BVG3 475 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 TTLL2Q9BWV7 592 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 ANLNQ9NQW6 1124 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 COMMD8Q9NX08 183 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 GMIPQ9P107 970 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
USP39-220ENST00000613444 R3HDM2Q9Y2K5 976 aaKnown RBP14.86□□□□□ -0.03
USP39-220ENST00000613444 SLC38A8A6NNN8 435 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 C5orf67F2Z3F1 127 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 CNPP09543 421 aaKnown RBP14.85□□□□□ -0.03
USP39-220ENST00000613444 DNAJB1P25685 340 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 YWHAQP27348 245 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 CTNNB1P35222 781 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 ERVFC1P60507 584 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 DEUP1Q05D60 604 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 DPYSL3Q14195 570 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 DPYSL2Q16555 572 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 TAC4Q86UU9 113 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 KCTD6Q8NC69 237 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 GIPC2Q8TF65 315 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 PCDH18Q9HCL0 1135 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 ALG13Q9NP73 1137 aaKnown RBP14.85□□□□□ -0.03
USP39-220ENST00000613444 DMGDHQ9UI17 866 aaKnown RBP14.85□□□□□ -0.03
USP39-220ENST00000613444 FZD10Q9ULW2 581 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 TRANK1O15050 2925 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 GOLGA6L10A0A0M3HER8 536 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 RAD51CO43502 376 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 PHF2O75151 1096 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 L1CAMP32004 1257 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 CDH6P55285 790 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 TAF10Q12962 218 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 MMRN1Q13201 1228 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 NME3Q13232 169 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 SPPL3Q8TCT6 385 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 PARD6BQ9BYG5 372 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 SLITRK6Q9H5Y7 841 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 TMPRSS4Q9NRS4 437 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 MTUS1Q9ULD2 1270 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 IRAK3Q9Y616 596 aa14.85□□□□□ -0.03
USP39-220ENST00000613444 OBSL1O75147 1896 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 ATG2AQ2TAZ0 1938 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 SYNJ2BP-COX16A0A087WUM0 186 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 TARSL2A2RTX5 802 aaKnown RBP14.84□□□□□ -0.03
USP39-220ENST00000613444 ZDHHC11BP0C7U3 371 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 HMGA1P17096 107 aaKnown RBP14.84□□□□□ -0.03
USP39-220ENST00000613444 CETN2P41208 172 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 CXCR3P49682 368 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 CREMQ03060 361 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 PDK2Q15119 407 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 GLE1Q53GS7 698 aaKnown RBP14.84□□□□□ -0.03
USP39-220ENST00000613444 BTBD8Q5XKL5 378 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 KAZNQ674X7 775 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 C8orf74Q6P047 294 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 VSIG1Q86XK7 387 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 PSTKQ8IV42 348 aaKnown RBP14.84□□□□□ -0.03
USP39-220ENST00000613444 TCEAL8Q8IYN2 117 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 ANKRD7Q92527 254 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 CASP10Q92851 521 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 FAF2Q96CS3 445 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 CYP4F11Q9HBI6 524 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 DDIT4Q9NX09 232 aa14.84□□□□□ -0.03
USP39-220ENST00000613444 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms