RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CAND1Q86VP6 1230 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TMCO6Q96DC7 493 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF560Q96MR9 790 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ERGIC2Q96RQ1 377 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 A0A0D9SFI3 127 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PEX1O43933 1283 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FBXO21O94952 628 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 DPYDQ12882 1025 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 USF2Q15853 346 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FIGNQ5HY92 759 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 GPATCH4Q5T3I0 446 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 APOL5Q9BWW9 433 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TRPM5Q9NZQ8 1165 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SRP68Q9UHB9 627 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PTBP2Q9UKA9 531 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 AP4B1Q9Y6B7 739 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CNTRLQ7Z7A1 2325 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 NWD1Q149M9 1564 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 RNASEH2AO75792 299 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 HSPD1P10809 573 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 NUP62P37198 522 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 BSPRYQ5W0U4 402 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 KRT26Q7Z3Y9 468 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SLCO6A1Q86UG4 719 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 MYCT1Q8N699 235 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 KRT35Q92764 455 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PRKAG3Q9UGI9 489 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 MYO3BQ8WXR4 1341 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PLD2O14939 933 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ORC5O43913 435 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ENO3P13929 434 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ATXN3P54252 364 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SNRPFP62306 86 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PPIL2Q13356 520 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TNNI3KQ59H18 835 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 IDO2Q6ZQW0 420 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FBXW8Q8N3Y1 598 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SGF29Q96ES7 293 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LACRTQ9GZZ8 138 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FPGT-TNNI3KV9GXZ4 949 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PDE2AO00408 941 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CHRNB1P11230 501 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SLC16A2P36021 539 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TGFBR2P37173 567 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CYP4F8P98187 520 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF267Q14586 743 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 HSD17B12Q53GQ0 312 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ARID3BQ8IVW6 561 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 C1QTNF1Q9BXJ1 281 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SERHLQ9NQF3 203 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 AFG3L2Q9Y4W6 797 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PEX16Q9Y5Y5 336 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TM7SF2O76062 418 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PRG2P13727 222 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 NUDT2P50583 147 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SLC35C2Q9NQQ7 365 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 V9GYQ6 96 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LAMA4Q16363 1823 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PNMA6EA0A0J9YXQ4 647 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FAM92AA1XBS5 289 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PSMD12O00232 456 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 PTENP60484 403 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FAM172AQ8WUF8 416 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LARP4BQ92615 738 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 OXCT2Q9BYC2 517 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LOC100653049A0A140TA62 436 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 EFCAB14O75071 495 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 KRT34O76011 436 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SERPINA6P08185 405 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 COILP38432 576 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CYP4F2P78329 520 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CYP4F3Q08477 520 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC142Q17RM4 750 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FKBP9P1Q75LS8 142 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF767PQ75MW2 155 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 DHFR2Q86XF0 187 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 DNAAF5Q86Y56 855 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 MMAAQ8IVH4 418 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CYP4X1Q8N118 509 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FRMD8P1Q9BZ68 369 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 HDHD2Q9H0R4 259 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 HPS4Q9NQG7 708 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 ARPP21Q9UBL0 812 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LNPEPQ9UIQ6 1025 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TFECO14948 347 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TLR3O15455 904 aaKnown RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FTLP02792 175 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 NFYCQ13952 458 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SSX2Q16385 188 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 NFIL3Q16649 462 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FAM47CQ5HY64 1035 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 SLC43A3Q8NBI5 491 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 CDRT15Q96T59 188 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 KATNAL1Q9BW62 490 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 AGPAT5Q9NUQ2 364 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 EDARQ9UNE0 448 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 B3GNT3Q9Y2A9 372 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 AGPSO00116 658 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms